Alternatives and similar repositories for Mjolnir:

Users that are interested in Mjolnir are comparing it to the libraries listed below

• genesis-release-r-ccs / genesis
  Source, test set, and document for Molecular Dynamics software, GENESIS.
  ☆32Updated last month
• MasatakaYm / Molecular-Simulation
  分子シミュレーションの理論や関連するトピックをまとめたノート
  ☆23Updated last year
• matsunagalab / MDToolbox.jl
  MDToolbox.jl: A Julia package for molecular dynamics trajectories analysis and modeling of biomolecules
  ☆21Updated last week
• fjclark / red
  Robust Equilibration Detection
  ☆20Updated last month
• maccallumlab / martini_openmm
  ☆53Updated last year
• openmm / openmmexampleplugin
  An example of how to write a plugin for OpenMM
  ☆31Updated last year
• noinil / genesis_cg_tool
  Prepare topology and coordinate file for CG models in Genesis.
  ☆11Updated 6 months ago
• cgmartini / martinize.py
  Create coarse grain Martini input files for Gromacs from (atomistic) pdb files.
  ☆33Updated 2 years ago
• jhenin / Methods-for-enhanced-sampling-and-free-energy-calculations
  Enhanced sampling methods for molecular dynamics simulations
  ☆36Updated 2 years ago
• JingHuangLab / openmm_deepmd_plugin
  ☆21Updated 7 months ago
• lilyminium / psiresp
  RESP with inter- and intra-molecular constraints in Psi4.
  ☆30Updated last year
• jhenin / qwrap
  Fast PBC wrapping and unwrapping for VMD
  ☆23Updated 4 months ago
• vuqv / cosmo
  COSMO: COarse-grained Simulation of intrinsically disordered prOteins with openMM
  ☆12Updated last year
• cdsgroup / resp
  A. Alenaizan's restricted electrostatic potential (RESP) plugin to Psi4
  ☆31Updated 5 years ago
• depablogroup / LAMMPS-3SPN2
  Coarse-grained molecular model of DNA (LAMMPS plugin)
  ☆17Updated 2 years ago
• KULL-Centre / CALVADOS
  ☆51Updated this week
• Gallicchio-Lab / openmm-atmmetaforce-plugin
  An OpenMM plugin that implements the Alchemical Transfer Potential
  ☆40Updated last year
• andrrizzi / tfep-revisited-2021
  Source code and input files associated to the paper "Targeted free energy perturbation revisited: Accurate free energies from mapped refe…
  ☆13Updated 3 years ago
• ShijiZ / PyRESP
  ☆11Updated last month
• bowman-lab / enspara
  Modeling molecular ensembles with scalable data structures and parallel computing
  ☆34Updated last month
• yakomaxa / PyMOL-Wasm
  PyMOL-wasm port's binary and html/javascript code
  ☆23Updated last year
• openforcefield / openff-evaluator
  A physical property evaluation toolkit from the Open Forcefield Consortium.
  ☆56Updated this week
• maccallumlab / meld
  Modeling with limited data
  ☆56Updated 4 months ago
• bioexcel / cp2K_qmmm_tutorials_for_biological_simulations
  Several QM/MM tutorials for biological simulations adapted to CP2K. Tutorials adapted from AMBER, GMX, NAMD and CPMD softwares.
  ☆22Updated 5 years ago
• insilichem / ommprotocol
  A command line application to launch molecular dynamics simulations with OpenMM
  ☆40Updated 2 years ago
• Inniag / openmm-scripts-amoeba
  OpenMM scripts for polarisable molecular dynamics with the AMOEBA force field
  ☆24Updated 4 years ago
• openforcefield / smirnoff99Frosst
  A general small molecule force field descended from AMBER99 and parm@Frosst, available in the SMIRNOFF format
  ☆28Updated 6 months ago
• MobleyLab / benchmarksets
  Benchmark sets for binding free energy calculations: Perpetual review paper, discussion, datasets, and standards
  ☆43Updated 3 years ago
• marrink-lab / martini-forcefields
  Collection of interaction and molecule parameters for the Martini3 force-field
  ☆14Updated 2 years ago
• VTX-Molecular-Visualization / VTX
  ☆36Updated 2 weeks ago