A lightweight, ultrafast and general embedding framework for large-scale spatial omics data
☆36Sep 1, 2026Updated 2 weeks ago
Alternatives and similar repositories for SpaLP
Users that are interested in SpaLP are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Reconstructing True 3D Spatial Omics at Single-Cell Resolution☆20May 13, 2026Updated 4 months ago
- ☆21Aug 17, 2026Updated last month
- scEntropy method and scEGMM framework☆18Oct 26, 2019Updated 6 years ago
- Cell identification in high-resolution Spatial Transcriptomics☆17Dec 3, 2025Updated 9 months ago
- ☆49Feb 26, 2026Updated 6 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Single-Cell Inference of Class Switch Recombination☆25Jun 19, 2026Updated 3 months ago
- ☆21Apr 6, 2026Updated 5 months ago
- cEll tyPe enrIChment☆17Dec 11, 2022Updated 3 years ago
- Australia graduate, entry-level & internship jobs — updated daily by Workopia☆94Updated this week
- AI chat platform with RAG, image recognition, SSE streaming, JWT auth, Redis, RabbitMQ, and Docker deployment.☆23Aug 5, 2026Updated last month
- inferring regulatory cellular dynamics☆190Sep 11, 2026Updated last week
- CellANOVA: Cell State Space Analysis of Variance for signal recovery in single cell batch integration☆55Oct 31, 2024Updated last year
- iterative clustering pipeline of big single cell datasets.☆40Sep 5, 2025Updated last year
- Pre-clinical drug discovery faces the low efficiency dilemma. One of the reasons is the lack of cross-drug efficacy evaluation infrastruc…☆14Dec 8, 2025Updated 9 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- 集成数据分析、流程图生成、浏览器自动化、视频内容总结、服务器监控、智能图表六大智能体，支持自然语言交互和智能路由。☆119Jan 30, 2026Updated 7 months ago
- [ICML 2024] VQDNA: Unleashing the Power of Vector Quantization for Multi-Species Genomic Sequence Modeling☆10Sep 22, 2024Updated last year
- scSurvival is a new tool for survival analysis from single cell cohort dataset.☆28Apr 27, 2026Updated 4 months ago
- ☆24Nov 3, 2025Updated 10 months ago
- Original materials for the "Introduction to Solving Biological Problems with Python" 2 days course☆10Jun 25, 2018Updated 8 years ago
- Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data☆31Oct 24, 2024Updated last year
- Visualize clonal expansion via circle-packing. 'APackOfTheClones' extends 'scRepertoire' to produce a publication-ready visualization of …☆21Aug 28, 2025Updated last year
- Spatial-Linked Alignment Tool☆95Dec 20, 2024Updated last year
- Single Cell Oriented Reconstruction of PANDA-based Individually Optimized Networks☆28Sep 2, 2026Updated 2 weeks ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆17Apr 15, 2025Updated last year
- A data pipeline built in Nextflow to process spatial and single-cell experiment data for visualisation in WebAtlas☆71Apr 24, 2026Updated 4 months ago
- cross-species analysis of cell identities, markers and regulations☆13Jul 11, 2025Updated last year
- Fast spatial deconvolution via leverage-score sketching — scales to million-spot datasets while preserving rare cell type signals.☆26Sep 9, 2026Updated last week
- fast hierarchical clustering for large-scale single-cell data☆11Jul 11, 2021Updated 5 years ago
- 高价值漏洞监控与推送☆83Mar 29, 2026Updated 5 months ago
- Ordering gene-expression and functional events in single-cell experiments☆33Jul 6, 2026Updated 2 months ago
- Integrating GWAS and spatial transcriptomics for spatially resolved mapping of cells associated with human complex traits.☆220Aug 24, 2026Updated 3 weeks ago
- scRNA-seq data visualization from scrattch☆30Aug 20, 2025Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Reconstructing spatiotemporal dynamics from spatial transcriptome snapshots☆69Apr 12, 2026Updated 5 months ago
- Spatially constrained color profiling for visualizing single-cell resolution spatial data☆26Sep 23, 2024Updated last year
- MALDIpy: a Python package for single-cell analysis of imaging mass spectrometry data (Cell Metabolism 2024)☆21Jun 12, 2024Updated 2 years ago
- Data analysis for the moscot-framework project☆25Feb 27, 2026Updated 6 months ago
- inference of transcription factor activity at the single cell level☆29Jul 2, 2026Updated 2 months ago
- mesa package for Methylation Enrichment Sequencing Analysis☆16Updated this week
- ☆10Nov 5, 2023Updated 2 years ago