chromatix-team / chromatix
Differentiable wave optics using JAX! Documentation can be found at https://chromatix.readthedocs.io
ā75Updated this week
Related projects ā
Alternatives and complementary repositories for chromatix
- python functions for simulating optical transfer functionsā71Updated 7 months ago
- šā±ļø Official implementation for "neural space-time model for dynamic multi-shot imaging"ā28Updated last month
- Python bindings for scalar and vectorial models of the 3D microscope point spread function.ā44Updated 6 months ago
- widget for PSF simulation with aberrationsā26Updated last year
- This is PyFocus, a Python package that provides high-level functions and an user interface to perform full vectorial calculations of the ā¦ā14Updated last year
- Official implementation of Ring Deconvolution Microscopy from https://arxiv.org/abs/2206.08928ā30Updated 3 months ago
- Kang, I., Zhang, Q., Yu, S.X. et al. Coordinate-based neural representations for computational adaptive optics in widefield microscopy. Nā¦ā11Updated 4 months ago
- ā41Updated 2 years ago
- Things we use regularlyā29Updated 2 months ago
- Fast and accurate aberration estimation from 3D bead images using convolutional neural networksā18Updated 2 years ago
- ā21Updated 3 years ago
- Automatic Correction for sCMOS-related Noiseā17Updated 3 years ago
- Python library for diffraction tomography with the Born and Rytov approximationsā42Updated last year
- ā21Updated 4 months ago
- GPU accelerated beam propagation tools for biological light tissue simulationsā35Updated 6 years ago
- A toolbox for analysing and simulating Image Scanning Microscopy (ISM) datasets.ā11Updated 3 weeks ago
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopyā26Updated 3 weeks ago
- 3D Structured illumination microscopy (3D-SIM) reconstruction softwareā28Updated last month
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopyā38Updated 3 weeks ago
- code of the registration and deconvolution projectā33Updated 3 years ago
- Python implementation of ptylabā18Updated 3 weeks ago
- ā27Updated 3 weeks ago
- ā35Updated 4 years ago
- Image acquisition software for mesoSPIM light-sheet microscopes.ā37Updated this week
- Seeded Iterative Demixing (SID) of neuronal activity recordings made using Light Field Microscopy (LFM)ā27Updated 4 years ago
- Modular and scalable computational imaging in Python with GPU/out-of-core computing.ā121Updated 3 months ago
- A package for processing diSPIM images with GPU implementationā11Updated 2 years ago
- [DEPREACATED] Python interface for data-driven microscopy with Micro-manager/Micro-Magellanā14Updated 4 years ago
- Optimization framework developed in Pytorch, allowing calibration, and joint optimization of optics and deep learning models.ā51Updated last year
- A Python software library with a variety of functions for (optical) microscopy image restoration, reconstruction and analysis.ā72Updated 3 years ago