cytomine / Cytomine-core
Cytomine-Core is the main web server implementing the Cytomine API
☆70Updated last year
Related projects: ⓘ
- Cytomine Community Edition Legacy☆35Updated last year
- The official deployment of the Digital Slide Archive and HistomicsTK.☆108Updated 2 weeks ago
- Delete the label from a whole-slide image☆57Updated 3 years ago
- A versatile image analysis software for biological image-based quantification using machine learning, especially for whole slide imaging.☆60Updated 3 years ago
- A Girder plugin for pathology image annotations and analysis.☆56Updated last week
- Full package for applying deep learning to virtual slides.☆67Updated 6 years ago
- Python package for reading DICOM WSI file sets.☆32Updated last week
- SlideRunner is a tool for massive cell annotations in whole slide images☆75Updated 11 months ago
- Python library for converting WSI files to DICOM☆55Updated 2 months ago
- Conversion tool/library for converting whole slide images to DICOM☆75Updated 4 months ago
- Syntax - the arrangement of whole-slide-images and their image tiles to create well-formed computational pathology pipelines.☆55Updated last year
- Whole Slide Digital Pathology Image Tissue Localization☆44Updated 11 months ago
- An open-source digital pathology based rapid image annotation tool☆74Updated 5 months ago
- ⚡ Open-source software for deep learning-based digital pathology☆121Updated 3 months ago
- ☆30Updated 4 months ago
- Interoperable web-based slide microscopy viewer and annotation tool☆117Updated 2 weeks ago
- 3D Slicer module for browsing and downloading medical imaging collections from The Cancer Imaging Archive (TCIA).☆18Updated 4 months ago
- A whole-slide image reader for TensorFlow☆21Updated this week
- Python wrapper library for PMA.start, a universal viewier for whole slide imaging and microscopy☆28Updated 4 months ago
- A Python module that produces image patches and annotation masks from whole slide images for deep learning in digital pathology.☆78Updated 2 years ago
- A human in the loop solution to machine learning for pathologists (easy semantic segmentation of WSI)☆51Updated 4 years ago
- A tool for training machine-learning models with whole-slide imaging datasets☆22Updated 8 months ago
- Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay☆65Updated 11 months ago
- ☆49Updated this week
- Survival Convolutional Neural Networks☆68Updated last year
- An optimized pipeline for working with Whole Slide Image (WSI) data in Tensorflow☆15Updated 3 years ago
- ☆19Updated 10 months ago
- A High-Throughput Workflow for Preprocessing, Deep Learning Analytics and Interpretation in Digital Pathology☆39Updated last year
- Digital Pathology Whole Slide Image Analysis Toolbox☆48Updated last year
- TiffSlide - cloud native openslide-python replacement based on tifffile☆82Updated 7 months ago