flatironinstitute / spikeforest2Links
SpikeForest -- spike sorting analysis for website -- version 2
☆35Updated 3 years ago
Alternatives and similar repositories for spikeforest2
Users that are interested in spikeforest2 are comparing it to the libraries listed below
Sorting:
- WIP: Python port of Kilosort2☆50Updated 2 years ago
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆46Updated 6 years ago
- Automatic spike sorting up to 64 channels☆54Updated 4 years ago
- IBL core shared libraries☆66Updated last week
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆71Updated last week
- Neuroelectrophysiology object model and data analysis in Python.☆50Updated 5 months ago
- Code for internal lab sharing - polishing has started but is by no means complete☆131Updated 2 years ago
- Functions to assess quality of spike sorting results☆34Updated 2 years ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆122Updated last year
- Revealing neural correlates of behavior without behavioral measurements☆16Updated 6 years ago
- Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.☆50Updated 4 years ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆139Updated last month
- Code accompanying Steinmetz et al., 2019☆60Updated 4 years ago
- Fast and scalable spike sorting in python☆95Updated 5 months ago
- Automatic spike sorting, cluster visualization, spike sorting GUIs☆46Updated last month
- Library to perform Slice Tensor Component Analysis (sliceTCA)☆59Updated 10 months ago
- Fitting and simulation of Poisson generalized linear model for single and multi-neuron spike trains (Pillow et al 2008).☆43Updated 6 years ago
- a visualization method for neural data☆241Updated 9 months ago
- State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data☆52Updated 3 months ago
- pynapple collaborative data analysis (high level python scripts)☆38Updated last month
- YASS: Yet Another Spike Sorter☆70Updated 3 years ago
- SpikeGLX recording system GUI [Neuropixels NI]☆101Updated this week
- A open toolbox of several machine learning approaches for sharp-wave ripple detection☆32Updated this week
- pyqt5 dependent applications for IBL sessions☆32Updated 3 months ago
- Tools for analyzing spiking data from single-neuron recodings.☆29Updated last month
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆111Updated 3 months ago
- GLMCC: The generalized linear model for spike cross-correlation (Kobayashi et al., Nature Communications, 2019)☆36Updated 3 years ago
- ☆60Updated 3 years ago
- Web app for viewing results of ephys spike sorting☆27Updated 4 months ago
- "Approaches to Study Neural Circuits" course☆65Updated last year