MIT-LCP / mimic-cookbook
Cookbook of sql scripts for MIMIC-II
☆17Updated 9 years ago
Alternatives and similar repositories for mimic-cookbook:
Users that are interested in mimic-cookbook are comparing it to the libraries listed below
- ☆30Updated 7 years ago
- Predicting 30-day ICU readmissions from the MIMIC-III database☆84Updated 6 years ago
- AMIA submission examining note-derived vector representations☆9Updated last year
- Corresponding code for experiments described in "Predicting Clinical Outcomes Across Changing Electronic Health Records." Presented at KD…☆11Updated 7 years ago
- A Python library to load and analyze the MIMIC III Critical Care Database☆28Updated 2 years ago
- Quick script to parse out medications from discharge summaries in MIMIC format. Not that this approach uses minimal NLP, and can be vatly…☆28Updated 7 years ago
- Real time mortality prediction in the MIMIC-III database☆53Updated 6 years ago
- Download and load MIMIC-III into a PostgreSQL DB on an Ubuntu VM☆10Updated 8 years ago
- Prediction of ICU Readmissions Using Data at Patient Discharge using MIMICIII Database☆26Updated 3 years ago
- Python ICD9 library☆13Updated 9 years ago
- Repository for the paper describing MIMIC-III☆76Updated 8 years ago
- Materials for the BIDMC datathon (Sat 29 Feb 2020)☆12Updated 7 months ago
- a Python tool to extract and structure numeric lab test comparison statements from text☆22Updated last year
- Learning from Discharge Summaries to extract mentioned diagnoses using Hierarchical Attention Model☆34Updated 7 years ago
- An R package for evaluating phenotype algorithms.☆17Updated 4 months ago
- Predictive Modeling in Urgent Care - A Comparative Study of Machine Learning Approaches☆21Updated 5 years ago
- Embedding Complexity In the Data Representation Instead of In the Model (arXiv:1802.04233)☆24Updated 7 years ago
- Mapping the MIMIC-III database to the OMOP schema☆131Updated 10 months ago
- This is a complete preprocessing, model training, and figure generation repo for "An attention based deep learning model of clinical even…☆77Updated 9 months ago
- Miscellaneous tools for clinical ML☆29Updated 7 years ago
- ACT COVID Ontology☆15Updated 3 years ago
- The PEDSnet Data Quality Assessment Toolkit (OMOP CDM)☆24Updated 3 years ago
- Data and basic scrubbing of the FDA Adverse Event Reporting System data☆12Updated 9 years ago
- Clinical NLP workshop for ODSC☆39Updated 5 years ago
- A torch package for learning diagnosis models from temporal patient data.☆113Updated 7 years ago
- queries for mimic-iv☆11Updated 3 years ago
- Python library for hierarchy of ICD9 Codes☆103Updated 6 years ago
- Python package for comorbidity index calculation☆20Updated 7 years ago
- Implementation of Deep Patient Representation of Clinical Notes at Intensive Care Unit for Multi-Task Prediction☆32Updated 5 years ago
- ☆33Updated 5 years ago