☆14Oct 17, 2025Updated 6 months ago
Alternatives and similar repositories for scNodes
Users that are interested in scNodes are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Jupyter-based tool for membrane segmentation manipulation☆10Jul 9, 2025Updated 9 months ago
- Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.☆30Updated this week
- ☆24Apr 6, 2026Updated 3 weeks ago
- Self-supervised deep learning framework for CryoET analysis☆20Apr 11, 2026Updated 3 weeks ago
- Pipeline for the automatic detection and segmentation of particles and cellular structures in 3D Cryo-ET data, based on deep learning (co…☆41Jan 30, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Generates synthetic datasets for Cryo-Electron Tomography☆36Feb 27, 2026Updated 2 months ago
- ☆13May 22, 2025Updated 11 months ago
- This is the main repository for MemBrain v2. It includes MemBrain-seg, MemBrain-pick, MemBrain-stats, and several Napari tools.☆23Jan 29, 2025Updated last year
- GPU accelerated software package for CTF estimation of cryoEM micrographs and cryoET tilt series☆25Mar 5, 2026Updated last month
- IMOD model files as pandas dataframes in Python☆12Jun 26, 2025Updated 10 months ago
- Morphometrics for Membrane Surfaces Segmented from Cryo-ET or other volumetric imaging.☆33Mar 16, 2026Updated last month
- segmentation of spherical vesicles in cryo-electron tomography☆12Oct 25, 2024Updated last year
- Read MRC format image files into napari using the mrcfile package from CCP-EM☆19May 17, 2024Updated last year
- Transformer And Rapid Dimensionless Instance Segmentation☆21Apr 19, 2026Updated 2 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- SerialEM mdoc files as pandas dataframes☆14Feb 4, 2026Updated 3 months ago
- ☆55Aug 19, 2024Updated last year
- ☆71Apr 20, 2026Updated 2 weeks ago
- a tool for using surfaces to explore volumetric data in napari☆19Feb 25, 2026Updated 2 months ago
- Singularity image for cryo-CARE☆38Jan 7, 2022Updated 4 years ago
- Resources for Heinrich et al., 2021☆19May 28, 2021Updated 4 years ago
- GPU-accelerated template matching for cryo-ET☆57Apr 14, 2026Updated 2 weeks ago
- A tool for creating and analyzing panoramic views of biological membranes in electron tomograms.☆16Mar 4, 2023Updated 3 years ago
- ☆23Oct 22, 2024Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A tool to support interactive machine learning for cryoET data☆12Aug 30, 2024Updated last year
- ☆49Apr 16, 2026Updated 2 weeks ago
- The repository of NEUBIAS textbook 2021☆11Jan 24, 2022Updated 4 years ago
- Python module to read/write SerialEM navigator files.☆12Jan 17, 2023Updated 3 years ago
- OPUS-SSRI☆13Dec 21, 2022Updated 3 years ago
- ☆43Apr 10, 2026Updated 3 weeks ago
- Phantom generator☆25Aug 8, 2025Updated 8 months ago
- ☆19Dec 22, 2025Updated 4 months ago
- A Modular Platform for Streamlining Automated Cryo-FIB Workflows☆25Mar 5, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A Matlab script for deconvolving the CTF in single micrographs/tomograms with a Wiener-like filter☆12Jun 26, 2019Updated 6 years ago
- Anisotropic correction of beam induced sample motion for cryo-electron microscopy and tomography☆59Oct 3, 2025Updated 7 months ago
- Badly written scripts for making cryoEM easier☆13Dec 15, 2020Updated 5 years ago
- cryo-EM tomogram simulator☆31Apr 23, 2026Updated last week
- 3D-CTF correction for cryo-electron tomography☆29Nov 8, 2018Updated 7 years ago
- ☆37Updated this week
- Perona-Malik diffusion or anisotropic diffusion is a computer vision filtering technique that aims at reducing image noise without reduci…☆12Sep 20, 2015Updated 10 years ago