Phantom generator
☆27Aug 8, 2025Updated 11 months ago
Alternatives and similar repositories for parakeet
Users that are interested in parakeet are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Self-supervised method for disentanglement, clustering and classification of objects in multidimensional image data☆17Aug 7, 2024Updated last year
- Graph Representation Analysis for Connected Embeddings☆34Oct 10, 2024Updated last year
- macromolecular structure files (.pdb/.mmCIF) as pandas DataFrames☆10Jun 22, 2026Updated 2 weeks ago
- Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.☆30Jul 1, 2026Updated last week
- A possible schema for cryoET geometry metadata☆12Aug 11, 2025Updated 11 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- a tool for using surfaces to explore volumetric data in napari☆22Jun 13, 2026Updated 3 weeks ago
- Jupyter-based tool for membrane segmentation manipulation☆10Jul 9, 2025Updated last year
- ☆19Jan 23, 2026Updated 5 months ago
- Definitions for a collaborative cryoET annotation tool.☆34Updated this week
- ☆40Jul 1, 2026Updated last week
- A tool to support interactive machine learning for cryoET data☆12Aug 30, 2024Updated last year
- IMOD model files as pandas dataframes in Python☆13Jun 26, 2025Updated last year
- Scripts to make cryo-electron tomography a bit easier☆15Jun 24, 2026Updated 2 weeks ago
- Generates synthetic datasets for Cryo-Electron Tomography☆37May 19, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆14Oct 17, 2025Updated 8 months ago
- ☆19Dec 22, 2025Updated 6 months ago
- A set of MATLAB wrapper scripts to help with pre-processing of tomography data.☆20Jun 2, 2026Updated last month
- Self-supervised learning for isotropic cryoET reconstruction☆91Dec 29, 2024Updated last year
- GPU accelerated software package for CTF estimation of cryoEM micrographs and cryoET tilt series☆25May 18, 2026Updated last month
- Badly written scripts for making cryoEM easier☆13Dec 15, 2020Updated 5 years ago
- ☆44Jun 16, 2026Updated 3 weeks ago
- Singularity image for cryo-CARE☆38Jan 7, 2022Updated 4 years ago
- Miscellaneous scripts for processing cryo-ET data☆22Feb 25, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆27Jun 29, 2026Updated last week
- ☆57Aug 19, 2024Updated last year
- Anisotropic correction of beam induced sample motion for cryo-electron microscopy and tomography☆61Oct 3, 2025Updated 9 months ago
- Tool for reconstruction and analysis of continuous heterogeneity of a cryo-EM dataset☆34Sep 18, 2025Updated 9 months ago
- Detect and erase gold fiducials in cryo-EM images☆16May 27, 2025Updated last year
- Learning to recover orientations from projections in single-particle cryo-EM☆15Jan 30, 2022Updated 4 years ago
- ☆13Jun 10, 2024Updated 2 years ago
- Two-Dimensional Template Matching implemented in Python☆16Jun 22, 2026Updated 2 weeks ago
- A cryo-electron microscopy image simulation library for building data analysis in JAX☆49Updated this week
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Efficient graph data structures and algorithms for fast slicing, visualization, and editing☆13Jul 1, 2026Updated last week
- Structure refinement and validation for crystallography and single particle analysis☆35Updated this week
- dictionary of monomers and links☆22Apr 19, 2026Updated 2 months ago
- GPU-accelerated template matching for cryo-ET☆63Jun 5, 2026Updated last month
- Guide to python package development for scientists☆27Updated this week
- From cryo-EM density map to atomic structure☆31Aug 17, 2025Updated 10 months ago
- Live processing and real time reconstruction of cryo☆57May 11, 2026Updated last month