A Modular Platform for Streamlining Automated Cryo-FIB Workflows
☆25Mar 5, 2025Updated last year
Alternatives and similar repositories for SerialFIB
Users that are interested in SerialFIB are comparing it to the libraries listed below
Sorting:
- A set of MATLAB wrapper scripts to help with pre-processing of tomography data.☆20Jan 23, 2026Updated last month
- This Toolbox is build for 3D correlative microscopy. It helps with 3D to 2D correlation of three dimensional confocal image stacks to two…☆12Apr 27, 2020Updated 5 years ago
- Parallel cryo electron tomography via beam image shift☆40Feb 17, 2026Updated last month
- Smart Parallel Automated Cryo Electron tomography☆24Mar 13, 2026Updated last week
- SerialEM, Python, and Unity Simulations for Cryo-Electron Tomography and Montage Tomography.☆16Oct 25, 2024Updated last year
- ☆54Aug 19, 2024Updated last year
- Live processing and real time reconstruction of cryo☆50Mar 2, 2026Updated 3 weeks ago
- Singularity image for cryo-CARE☆37Jan 7, 2022Updated 4 years ago
- Pipeline for the automatic detection and segmentation of particles and cellular structures in 3D Cryo-ET data, based on deep learning (co…☆41Jan 30, 2024Updated 2 years ago
- STOPGAP is a MATLAB-based package for subtomogram averaging.☆38Aug 6, 2025Updated 7 months ago
- Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.☆30Dec 1, 2025Updated 3 months ago
- TomoBEAR is a configurable and customizable modular pipeline for streamlined processing of cryo-electron tomographic data for subtomogram…☆29Jun 29, 2025Updated 8 months ago
- Blender application template simulating degrees of freedom in a focused ion beam system☆10Sep 3, 2021Updated 4 years ago
- membrane segmentation in 3D for cryo-ET☆88Feb 27, 2026Updated 3 weeks ago
- a bidirectional interface between Dynamo and the Warp-RELION-M pipeline☆19Jul 28, 2023Updated 2 years ago
- automated on-the-fly tilt-series alignment☆11Jul 6, 2021Updated 4 years ago
- Badly written scripts for making cryoEM easier☆13Dec 15, 2020Updated 5 years ago
- SerialEM mdoc files as pandas dataframes☆14Feb 4, 2026Updated last month
- A possible schema for cryoET geometry metadata☆11Aug 11, 2025Updated 7 months ago
- ☆19Dec 22, 2025Updated 3 months ago
- ☆24Feb 26, 2026Updated 3 weeks ago
- New program to follow Relion projects in a browser!☆47Jan 5, 2026Updated 2 months ago
- ☆43Nov 21, 2025Updated 4 months ago
- ☆11Mar 23, 2023Updated 3 years ago
- Miscellaneous scripts for processing cryo-ET data☆22Feb 25, 2025Updated last year
- A universal API for FIBSEM control☆30Jun 26, 2025Updated 8 months ago
- GPU accelerated software package for CTF estimation of cryoEM micrographs and cryoET tilt series☆25Mar 5, 2026Updated 2 weeks ago
- Scripts to make cryo-electron tomography a bit easier☆15Feb 26, 2026Updated 3 weeks ago
- structural heterogeneity analysis for cryo-ET subtomogram☆10Updated this week
- ☆10Feb 19, 2026Updated last month
- PyTom software for cryo-tomogram processing☆45Jan 5, 2026Updated 2 months ago
- 3D-CTF correction for cryo-electron tomography☆28Nov 8, 2018Updated 7 years ago
- ☆129Jun 18, 2025Updated 9 months ago
- ☆23Nov 15, 2025Updated 4 months ago
- Very simple script for EPU users which adds beam tilt classes to the star file☆11Nov 3, 2023Updated 2 years ago
- Complementary tools for Relion tomo☆12Mar 9, 2024Updated 2 years ago
- Public release of Ptolemy package for automated targeting of Cryo-EM grids☆18Mar 9, 2025Updated last year
- cryo_fit1 source codes, test files, live at .../phenix-xxxx/modules☆10Mar 25, 2022Updated 3 years ago
- OPUS-SSRI☆13Dec 21, 2022Updated 3 years ago