sklumpe / SerialFIBLinks
A Modular Platform for Streamlining Automated Cryo-FIB Workflows
☆24Updated 3 months ago
Alternatives and similar repositories for SerialFIB
Users that are interested in SerialFIB are comparing it to the libraries listed below
Sorting:
- SerialEM mdoc files as pandas dataframes☆13Updated 4 months ago
- SerialEM, Python, and Unity Simulations for Cryo-Electron Tomography and Montage Tomography.☆16Updated 7 months ago
- PIP package of cryoCARE☆33Updated last year
- Miscellaneous scripts for processing cryo-ET data☆15Updated 3 months ago
- ☆52Updated this week
- A set of MATLAB wrapper scripts to help with pre-processing of tomography data.☆19Updated 9 months ago
- A tool for conversion between subtomogram averaging softwares Dynamo and emClarity☆9Updated 5 years ago
- Scripts to make cryo-electron tomography a bit easier☆13Updated last month
- ☆47Updated 9 months ago
- GPU accelerated software package for CTF estimation of cryoEM micrographs and cryoET tilt series☆23Updated 3 weeks ago
- Smart Parallel Automated Cryo Electron tomography☆23Updated 3 weeks ago
- ☆17Updated last week
- automated on-the-fly tilt-series alignment☆10Updated 3 years ago
- ☆19Updated 3 months ago
- Jupyter-based tool for membrane segmentation manipulation☆9Updated last year
- Parallel cryo electron tomography via beam image shift☆35Updated 3 weeks ago
- Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.☆26Updated 2 weeks ago
- GPU-accelerated template matching for cryo-ET☆38Updated this week
- A possible schema for cryoET geometry metadata☆10Updated 4 months ago
- ☆10Updated this week
- cryo-EM tomogram simulator☆26Updated 2 weeks ago
- STOPGAP is a MATLAB-based package for subtomogram averaging.☆35Updated 9 months ago
- TomoBEAR is a configurable and customizable modular pipeline for streamlined processing of cryo-electron tomographic data for subtomogram…☆27Updated last month
- ☆31Updated last year
- TomoNet is a GUI based pipeline package focusing on cryoET and STA data processing☆17Updated last week
- Neural networks to analyze structural heterogeneity in cryo-electron sub-tomograms☆27Updated 5 months ago
- Live processing and real time reconstruction of cryo☆27Updated 2 weeks ago
- Singularity image for cryo-CARE☆33Updated 3 years ago
- autolamella is a python package for automated cryo-lamella preparation with focused ion beam milling.☆19Updated this week
- IMOD model files as pandas dataframes in Python☆11Updated 2 months ago