Alternatives and similar repositories for TARDIS:

Users that are interested in TARDIS are comparing it to the libraries listed below

• brisvag / blik
  Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.
  ☆25Updated 5 months ago
• bionanopatterning / Ais
  ☆17Updated last month
• sklumpe / SerialFIB
  A Modular Platform for Streamlining Automated Cryo-FIB Workflows
  ☆24Updated 2 months ago
• teamtomo / membrain-seg
  membrane segmentation in 3D for cryo-ET
  ☆65Updated last week
• SBC-Utrecht / pytom-match-pick
  GPU-accelerated template matching for cryo-ET
  ☆35Updated last month
• bpowell122 / tomodrgn
  Neural networks to analyze structural heterogeneity in cryo-electron sub-tomograms
  ☆26Updated 4 months ago
• bionanopatterning / scNodes
  ☆13Updated 2 months ago
• czimaginginstitute / AreTomo3
  Live processing and real time reconstruction of cryo
  ☆26Updated this week
• KosinskiLab / colabseg
  Jupyter-based tool for membrane segmentation manipulation
  ☆9Updated last year
• carsonpurnell / cryotomosim_CTS
  cryo-EM tomogram simulator
  ☆25Updated 2 months ago
• KudryashevLab / TomoBEAR
  TomoBEAR is a configurable and customizable modular pipeline for streamlined processing of cryo-electron tomographic data for subtomogram…
  ☆27Updated 3 weeks ago
• MPI-Dortmund / cryolo
  cryolo documentation
  ☆10Updated last year
• teamtomo / mdocfile
  SerialEM mdoc files as pandas dataframes
  ☆13Updated 3 months ago
• czimaginginstitute / AreTomo2
  ☆46Updated 8 months ago
• anmartinezs / polnet
  Generates synthetic datasets for Cryo-Electron Tomography
  ☆29Updated 2 weeks ago
• juglab / cryoCARE_T2T
  Singularity image for cryo-CARE
  ☆32Updated 3 years ago
• wan-lab-vanderbilt / STOPGAP
  STOPGAP is a MATLAB-based package for subtomogram averaging.
  ☆34Updated 9 months ago
• FrangakisLab / ArtiaX
  ArtiaX is an open-source extension of the molecular visualisation program ChimeraX.
  ☆34Updated last month
• czimaginginstitute / GCtfFind
  GPU accelerated software package for CTF estimation of cryoEM micrographs and cryoET tilt series
  ☆23Updated this week
• turonova / cryoCAT
  Contextual Analysis Tools for cryoET and subtomogram averaging
  ☆27Updated this week
• wan-lab-vanderbilt / TOMOMAN
  A set of MATLAB wrapper scripts to help with pre-processing of tomography data.
  ☆19Updated 8 months ago
• SBC-Utrecht / PyTom
  PyTom software for cryo-tomogram processing
  ☆41Updated 3 weeks ago
• juglab / cryoCARE_pip
  PIP package of cryoCARE
  ☆32Updated last year
• ZauggGroup / DeePiCt
  Pipeline for the automatic detection and segmentation of particles and cellular structures in 3D Cryo-ET data, based on deep learning (co…
  ☆35Updated last year
• czimaginginstitute / MotionCor3
  Anisotropic correction of beam induced sample motion for cryo-electron microscopy and tomography
  ☆50Updated 3 weeks ago
• teamtomo / imodmodel
  IMOD model files as pandas dataframes in Python
  ☆11Updated last month
• MLI-lab / DeepDeWedge
  Self-supervised deep learning for denoising and missing wedge reconstruction of cryo-ET tomograms
  ☆39Updated 2 weeks ago
• anmartinezs / pyseg_system
  De novo analysis for cryo-electron tomography
  ☆19Updated 6 months ago
• GrotjahnLab / surface_morphometrics
  Morphometrics for Membrane Surfaces Segmented from Cryo-ET or other volumetric imaging.
  ☆23Updated last week
• CellArchLab / MemBrain
  ☆31Updated last year