Finding the pitfalls of deep learning predictors of interacting residues in antibodies π¦
β25Sep 8, 2025Updated last year
Alternatives and similar repositories for topefind-public
Users that are interested in topefind-public are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Inpainting protein sequence and structureβ13Nov 10, 2023Updated 2 years ago
- Antibody Langauge Ensemble Fusion - fuses antibody structural ensemble and language representation for property predictionβ14Apr 23, 2024Updated 2 years ago
- Class to view Alphafold modelsβ11Jan 20, 2023Updated 3 years ago
- [IEEE TMM 2023] This is the official repo of the paper "Perceptual Quality Improvement in Videoconferencing using Keyframes-based GAN".β17Dec 10, 2024Updated last year
- Tools for annotation, processing and ML for antibody sequencesβ45Updated this week
- Virtual machines for every use case on DigitalOcean β’ AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Assessing the impact of mutations on antibody-antigen binding affinityβ18Dec 7, 2020Updated 5 years ago
- Active learning workflow to train and fine-tune molecular property predictors with chemist feedback for goal-oriented molecule generationβ¦β15Apr 25, 2025Updated last year
- All in one Structure-Based Virtual Screening workflow based on the concept of consensus docking.β60Jul 5, 2026Updated 2 months ago
- β18Sep 16, 2024Updated 2 years ago
- Automatically exported from code.google.com/p/pyplifβ10Nov 23, 2018Updated 7 years ago
- β12Feb 23, 2025Updated last year
- An antibody-specific language model focusing on NGL predictionβ45Aug 22, 2024Updated 2 years ago
- Official repository for "Plug & Play Directed Evolution for Proteins with Gradient-Based Discrete MCMC"β12Jul 18, 2023Updated 3 years ago
- β45Aug 1, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways β’ AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- open source repositoryβ149Nov 30, 2023Updated 2 years ago
- β17Dec 10, 2025Updated 9 months ago
- β144Aug 8, 2024Updated 2 years ago
- Open source library to work with molecular systemsβ14Updated this week
- In MT-BERT we reproduce a neural language understanding model which implements a Multi-Task Deep Neural Network (MT-DNN) for learning reβ¦β22Dec 2, 2021Updated 4 years ago
- β11May 22, 2024Updated 2 years ago
- dockECR: open consensus docking and ranking protocol for virtual screening of small moleculesβ28Oct 15, 2021Updated 4 years ago
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.β38Nov 7, 2024Updated last year
- β21Nov 21, 2025Updated 9 months ago
- 1-Click AI Models by DigitalOcean Gradient β’ AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Multiple sequence alignment browserβ12Dec 12, 2022Updated 3 years ago
- β13Mar 28, 2025Updated last year
- The Polaris datasets and benchmarks recipesβ15May 26, 2025Updated last year
- JavaScript framework for visual programmingβ17Jan 1, 2023Updated 3 years ago
- β60Updated this week
- Target predictionβ14May 8, 2020Updated 6 years ago
- convert alignment bam to pairwise alignment or multiple sequence alignment (msa) at genome specific regionβ13May 21, 2024Updated 2 years ago
- ASAP-SML: An Antibody Sequence Analysis Pipeline Using Statistical Testing and Machine Learningβ11Jul 6, 2023Updated 3 years ago
- random colab notebooks for biologyβ26Aug 23, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer β’ AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinityβ14Jul 9, 2025Updated last year
- β18Jul 9, 2018Updated 8 years ago
- FTDMP is a software system for running docking experiments and scoring/ranking multimeric models.β14Aug 3, 2026Updated last month
- Code for 'On Pre-trained Language Models For Antibody'β31Feb 1, 2023Updated 3 years ago
- β17Jul 7, 2024Updated 2 years ago
- KA-Search: Rapid and exhaustive sequence identity search of known antibodiesβ23Jul 9, 2024Updated 2 years ago
- Antibody-specific masked language modelβ82Sep 9, 2026Updated last week