LoqLab / yllmLinks
Yet another LLM command line interface
☆16Updated 6 months ago
Alternatives and similar repositories for yllm
Users that are interested in yllm are comparing it to the libraries listed below
Sorting:
- Tool for finding matches to degenerate sequence motifs in FASTA files.☆13Updated last year
- Pangenome graphs visualisation, distance computing, reconstruction of sequences and other utility functions☆34Updated last month
- Reference genome quality scores☆21Updated 4 years ago
- ☆16Updated 5 months ago
- Convert HAL to VG☆22Updated 10 months ago
- use variant nesting information to flter overlapping sites from vg deconstruct output☆26Updated 2 weeks ago
- De novo tandem repeat calling from PacBio HiFi data☆17Updated 2 weeks ago
- PERF is an Exhaustive Repeat Finder☆33Updated 4 years ago
- A module for improving the insertion sequences of structural variant calls☆30Updated 3 years ago
- For bluntifying overlapped GFAs☆13Updated 11 months ago
- ☆10Updated 2 years ago
- De novo chromosome-level scaffolding and phasing tool using Hi-C☆28Updated 3 months ago
- (WIP) best-practices workflow for rare disease☆60Updated 11 months ago
- Integrate multiple genome assemblies into a pangenome graph☆34Updated 3 years ago
- General purpose utility related to GAF files☆28Updated 3 weeks ago
- Methylation analysis pipeline for genome graph☆12Updated last month
- Visualization and charting JS library for streaming genomic data☆19Updated 6 months ago
- Codes for the Iso-Seq variant-calling paper☆11Updated 2 years ago
- Phasing reads with secondary alignments☆18Updated 6 months ago
- The command-line interface to GGD☆43Updated 2 years ago
- Minotour API, web and client code☆30Updated 2 years ago
- Symmetric DUST for finding low-complexity regions in DNA sequences☆42Updated last year
- GFAffix identifies walk-preserving shared affixes in variation graphs and collapses them into a non-redundant graph structure.☆36Updated 3 weeks ago
- ☆21Updated 4 months ago
- Ascertained Sequentially Markovian Coalescent☆16Updated 7 months ago
- convert CHAIN format to PAF format☆14Updated 6 months ago
- A bioinformatics best-practice analysis pipeline for calling structural variants (SVs), copy number variants (CNVs) and repeat region exp…☆22Updated 4 months ago
- ☆12Updated 3 years ago
- A package to run real time analysis of nanopore methylation data.☆14Updated this week
- ChIP-seq peak caller for reads mapped to a graph-based reference genome☆21Updated 10 months ago