LoqLab / yllmLinks
Yet another LLM command line interface
☆16Updated last year
Alternatives and similar repositories for yllm
Users that are interested in yllm are comparing it to the libraries listed below
Sorting:
- Workflow Description Language (WDL) scripts for common vg workflows☆21Updated last month
- Codes for the Iso-Seq variant-calling paper☆11Updated 2 years ago
- Transformer-based sequence correction method for genome assembly polishing☆97Updated 10 months ago
- (WIP) best-practices workflow for rare disease☆62Updated last year
- ☆27Updated last month
- A command-line interface for Sentieon pipelines☆14Updated last week
- De novo tandem repeat calling from PacBio HiFi data☆19Updated 2 months ago
- ☆16Updated last year
- VcfExplorer regroups several programs which principal aims are to map DNA and RNAseq data onto reference genome sequence, perform variant…☆15Updated last year
- ☆71Updated 2 years ago
- ☆43Updated last month
- ILIAD: A suite of automated Snakemake workflows for processing genomic data for downstream applications☆28Updated 2 years ago
- PhenoSV: Interpretable phenotype-aware model for the prioritization of genes affected by structural variants.☆17Updated 11 months ago
- MindTheGap is a SV caller for short read sequencing data dedicated to insertion variants (all sizes and types). It can also be used as a …☆37Updated 3 years ago
- SNP-Assisted SV Calling and Phasing Using ONT☆25Updated 2 years ago
- A fast seed-embed-extend based sequence mapper and aligner☆23Updated last year
- StrVCTVRE, a structural variant classifier for exonic deletions and duplications☆19Updated 2 years ago
- ☆23Updated 8 months ago
- CAncer Standards Long-read Evaluation☆52Updated 2 months ago
- Accelerated genomics workflows in the Workflow Description Language☆35Updated 2 weeks ago
- Run multiple programs to check if a VCF is usable☆11Updated 5 years ago
- ☆23Updated 2 years ago
- VCF Observer is a VCF file analysis, comparison, and visualization tool.☆18Updated last year
- PERF is an Exhaustive Repeat Finder☆33Updated 4 years ago
- Simple convertor from bam to FASTQ☆26Updated 10 years ago
- 🧬 High-performance VCF file parser and reformatter with VEP annotation support. Converts complex VCF files to analyzable TSV format …☆44Updated 5 months ago
- An HLA star-calling tool for PacBio HiFi data types☆21Updated 11 months ago
- Scripts to Analyze DTC Sequencing and Genotyping Data (and some comparisons to Veritas WGS data)☆20Updated last year
- Tool for finding matches to degenerate sequence motifs in FASTA files.☆13Updated last year
- A tool for genotyping Variable Number Tandem Repeats (VNTR) from sequence data☆47Updated last year