open source bagel recipe; let's raise the quality of bagels worldwide
☆29Nov 3, 2024Updated last year
Alternatives and similar repositories for bagels
Users that are interested in bagels are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆20Mar 31, 2021Updated 5 years ago
- An automated workflow for processing ddRADseq data using Stacks v2.4. Starts with sequencer files, and ends with various input files for …☆10Apr 25, 2024Updated 2 years ago
- a short graduate population biology course☆13Feb 22, 2023Updated 3 years ago
- Code for the Brassica oleracea/rapa/napus genomic comparison☆16Apr 29, 2021Updated 5 years ago
- ☆14Aug 13, 2026Updated 3 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆83Apr 30, 2021Updated 5 years ago
- Identifying large scale inversions between two genomes by mapping genome 1's unique kmers onto genome 2.☆10Jun 6, 2025Updated last year
- Scripts for viewing Slurm batch job resource usages☆11Jan 3, 2022Updated 4 years ago
- Example data for R/qtl2☆13May 29, 2026Updated 3 months ago
- intro to programming for IE2 evolution students☆12Jan 31, 2024Updated 2 years ago
- Spatio-temporal trends in habitat suitability from ecological niche models☆15Feb 4, 2026Updated 6 months ago
- Embed excel file as an excel-alike table into sphinx documentation☆13Aug 20, 2017Updated 9 years ago
- API for herding data submissions☆13Updated this week
- A fully convolutional architecture for basecalling nanopore RNA sequencing data☆12Sep 26, 2024Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Misc. utilities☆11May 21, 2019Updated 7 years ago
- Samwell: a python package for using genomic files... well☆20Jun 28, 2022Updated 4 years ago
- A Python3 script for removal of outlier sequences from a multiple sequence alignment (FASTA format).☆10Jul 6, 2026Updated last month
- Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata☆58Feb 17, 2022Updated 4 years ago
- Run a command and report its process tree's CPU, memory, and I/O usage☆21Updated this week
- A tooL for Prokaryotic Phylogeny And Clustering Analysis☆14Aug 5, 2026Updated 3 weeks ago
- Utilities for manipulating chromosome names, including modifying them to follow a particular naming style☆36May 22, 2026Updated 3 months ago
- Efficient C functions to compute the summary statistics (flagstats) for sequencing read sets.☆15Aug 1, 2026Updated last month
- Code accompanying to "COVID-19 transmission in supermarkets using agent-based modelling"☆11May 3, 2021Updated 5 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Collection of simple C scripts for parsing vcf or bam files using the htslib C library. These scripts can be used as the starting point f…☆11Dec 11, 2020Updated 5 years ago
- Parallel implementation of the LAST aligner☆18Nov 27, 2016Updated 9 years ago
- Datamonkey - Run state-of-the-art statistical models through the comfort of your browser☆10Updated this week
- An R package to repair broken GIS polygons using the prepair (https://github.com/tudelft3d/prepair) Cpp library - mirror to the Gitlab re…☆12Nov 9, 2022Updated 3 years ago
- The software involved in the MetaPhase project, as described in G3 (http://dx.doi.org/10.1534/g3.114.011825)☆17Oct 12, 2018Updated 7 years ago
- ☆11Aug 26, 2022Updated 4 years ago
- A proof of concept daisy-chaining Nextflow workflows☆34Aug 24, 2026Updated last week
- This repository provides source code for several pipelines dedicated to the alignment of nucleotide coding sequences that are based on MA…☆43Jan 3, 2026Updated 8 months ago
- A Nextflow pipeline to play Doom☆10Dec 1, 2025Updated 9 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Retrieve data in genomic intervals with a Python interface for tabix.☆82Aug 10, 2017Updated 9 years ago
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆31Mar 5, 2018Updated 8 years ago
- ☆16May 23, 2026Updated 3 months ago
- This repository contains FAQs (Frequently Asked Questions) for genome in a bottle project☆10Sep 28, 2018Updated 7 years ago
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆21Dec 8, 2020Updated 5 years ago
- Quality control for phylogenetic analyses☆13Updated this week
- ☆10Apr 17, 2023Updated 3 years ago