A somewhat cleaned-up version of the TOM toolbox for electron tomography
☆16Nov 26, 2016Updated 9 years ago
Alternatives and similar repositories for tom
Users that are interested in tom are comparing it to the libraries listed below
Sorting:
- A CTF Simulation Web App☆13Aug 6, 2025Updated 6 months ago
- ☆12Apr 4, 2023Updated 2 years ago
- Badly written scripts for making cryoEM easier☆13Dec 15, 2020Updated 5 years ago
- A set of MATLAB wrapper scripts to help with pre-processing of tomography data.☆20Jan 23, 2026Updated last month
- GPU accelerated software package for CTF estimation of cryoEM micrographs and cryoET tilt series☆25Feb 9, 2026Updated 3 weeks ago
- STOPGAP is a MATLAB-based package for subtomogram averaging.☆38Aug 6, 2025Updated 6 months ago
- Self-supervised deep learning framework for CryoET analysis☆20Feb 18, 2026Updated 2 weeks ago
- Parallel cryo electron tomography via beam image shift☆40Feb 17, 2026Updated 2 weeks ago
- 3D-CTF correction for cryo-electron tomography☆28Nov 8, 2018Updated 7 years ago
- TomoBEAR is a configurable and customizable modular pipeline for streamlined processing of cryo-electron tomographic data for subtomogram…☆29Jun 29, 2025Updated 8 months ago
- a bidirectional interface between Dynamo and the Warp-RELION-M pipeline☆19Jul 28, 2023Updated 2 years ago
- ☆16Feb 4, 2017Updated 9 years ago
- Complementary tools for Relion tomo☆12Mar 9, 2024Updated last year
- Cryo-EM/ET image analysis☆12Sep 19, 2025Updated 5 months ago
- structural heterogeneity analysis for cryo-ET subtomogram☆10Feb 23, 2026Updated last week
- ☆23Nov 15, 2025Updated 3 months ago
- SerialEM mdoc files as pandas dataframes☆14Feb 4, 2026Updated 3 weeks ago
- ☆13May 22, 2025Updated 9 months ago
- GPU accelerating computing for Bayesian inference of electron microscopy images. BioEM is a publicly available software that enables the …☆11Apr 7, 2023Updated 2 years ago
- automated on-the-fly tilt-series alignment☆11Jul 6, 2021Updated 4 years ago
- ☆53Aug 19, 2024Updated last year
- SmartScope is a framework for systematic evaluation of cryo-EM specimens☆17Feb 24, 2026Updated last week
- Pipeline for the automatic detection and segmentation of particles and cellular structures in 3D Cryo-ET data, based on deep learning (co…☆40Jan 30, 2024Updated 2 years ago
- Anisotropic correction of beam induced sample motion for cryo-electron microscopy and tomography☆58Oct 3, 2025Updated 5 months ago
- Python scripts for easy RELION STAR file manipulation.☆24Jan 21, 2026Updated last month
- A CNN for denoising cryo-EM images☆13Dec 9, 2019Updated 6 years ago
- OPUS-SSRI☆13Dec 21, 2022Updated 3 years ago
- SerialEM, Python, and Unity Simulations for Cryo-Electron Tomography and Montage Tomography.☆16Oct 25, 2024Updated last year
- ☆19Feb 3, 2025Updated last year
- cryo-EM tomogram simulator☆30Feb 18, 2026Updated 2 weeks ago
- Contextual Analysis Tools for cryoET and subtomogram averaging☆34Feb 10, 2026Updated 3 weeks ago
- New program to follow Relion projects in a browser!☆47Jan 5, 2026Updated last month
- Rapidly simulate realistic cryo-EM particles☆18May 18, 2023Updated 2 years ago
- A tool for creating and analyzing panoramic views of biological membranes in electron tomograms.☆16Mar 4, 2023Updated 3 years ago
- Miscellaneous scripts for processing cryo-ET data☆21Feb 25, 2025Updated last year
- Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.☆30Dec 1, 2025Updated 3 months ago
- simplify the handling of large sets of Euler angles in Python☆33Feb 1, 2022Updated 4 years ago
- A Python implementation of the MRC2014 file format☆87Sep 17, 2025Updated 5 months ago
- Singularity image for cryo-CARE☆37Jan 7, 2022Updated 4 years ago