Contextual Analysis Tools for cryoET and subtomogram averaging
☆42Oct 23, 2026Updated last week
Alternatives and similar repositories for cryoCAT
Users that are interested in cryoCAT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Template Learning method for particle picking in cryo-ET☆13Jul 24, 2025Updated last year
- Python scripts to manipulate Relion tomo STAR files and much more...☆15Mar 23, 2026Updated 7 months ago
- cryo-ET workflow☆11Updated this week
- Complementary tools for Relion tomo☆12Mar 9, 2024Updated 2 years ago
- cryo-EM tomogram simulator☆35Updated this week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Miscellaneous scripts for processing cryo-ET data☆23Jul 29, 2026Updated 3 months ago
- Self-supervised deep learning framework for CryoET analysis☆20Sep 28, 2026Updated last month
- PyTom software for cryo-tomogram processing☆46Jan 5, 2026Updated 9 months ago
- STOPGAP is a MATLAB-based package for subtomogram averaging.☆40Jun 5, 2026Updated 5 months ago
- ☆87Oct 21, 2026Updated 2 weeks ago
- GPU-accelerated template matching for cryo-ET☆65Sep 30, 2026Updated last month
- Scripts and Tools for Electron Microscopy Image Analysis.☆11Jul 27, 2026Updated 3 months ago
- Rapid Cryo-ET Reconstruction via Transform-Localized Deep Learning☆21Aug 11, 2026Updated 2 months ago
- Live processing and real time reconstruction of cryo☆61Oct 5, 2026Updated 3 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- learns to improve tilt-series alignment by making it worse☆39Oct 8, 2026Updated 3 weeks ago
- A set of MATLAB wrapper scripts to help with pre-processing of tomography data.☆21Jun 2, 2026Updated 5 months ago
- a bidirectional interface between Dynamo and the Warp-RELION-M pipeline☆23Jul 28, 2023Updated 3 years ago
- TomoBEAR is a configurable and customizable modular pipeline for streamlined processing of cryo-electron tomographic data for subtomogram…☆30Jun 29, 2025Updated last year
- ☆31Oct 20, 2026Updated 2 weeks ago
- ☆57Aug 19, 2024Updated 2 years ago
- 🍦Icecream: a self-supervised framework for cryo-ET reconstruction☆37Sep 15, 2026Updated last month
- PIP package of cryoCARE☆46Apr 2, 2024Updated 2 years ago
- Scripts to make cryo-electron tomography a bit easier☆15Oct 5, 2026Updated 3 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆11Sep 9, 2024Updated 2 years ago
- A curated list of awesome computational cryo-ET methods.☆74Nov 23, 2025Updated 11 months ago
- Self-supervised deep learning for denoising and missing wedge reconstruction of cryo-ET tomograms☆56Jul 29, 2025Updated last year
- Pipeline for the automatic detection and segmentation of particles and cellular structures in 3D Cryo-ET data, based on deep learning (co…☆42Jan 30, 2024Updated 2 years ago
- Detect and erase gold fiducials in cryo-EM images☆17May 27, 2025Updated last year
- Neural networks to analyze structural heterogeneity in cryo-electron sub-tomograms☆33Oct 23, 2026Updated last week
- ☆48Oct 20, 2026Updated 2 weeks ago
- ☆38Aug 7, 2024Updated 2 years ago
- Python scripts for easy RELION STAR file manipulation.☆28Mar 24, 2026Updated 7 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- 3D-CTF correction for cryo-electron tomography☆33Nov 8, 2018Updated 7 years ago
- IsoNet at higher resolution☆40Updated this week
- Converts Dynamo tables to star files for coordinate import into RELION 4.0☆14Jul 25, 2023Updated 3 years ago
- Scripts to simulation of Tomograms with the TEM Simulator easy.☆13Dec 18, 2024Updated last year
- Overcoming the preferred orientation problem in cryoEM with self-supervised deep-learning☆39Updated this week
- A somewhat cleaned-up version of the TOM toolbox for electron tomography☆16Nov 26, 2016Updated 9 years ago
- Self-supervised learning for isotropic cryoET reconstruction☆92Dec 29, 2024Updated last year