Contextual Analysis Tools for cryoET and subtomogram averaging
☆38May 18, 2026Updated last week
Alternatives and similar repositories for cryoCAT
Users that are interested in cryoCAT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Complementary tools for Relion tomo☆12Mar 9, 2024Updated 2 years ago
- Python scripts to manipulate Relion tomo STAR files and much more...☆15Mar 23, 2026Updated 2 months ago
- Live processing and real time reconstruction of cryo☆54May 11, 2026Updated 2 weeks ago
- cryo-EM tomogram simulator☆31Apr 23, 2026Updated last month
- Self-supervised deep learning framework for CryoET analysis☆20Apr 11, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Miscellaneous scripts for processing cryo-ET data☆22Feb 25, 2025Updated last year
- TomoBEAR is a configurable and customizable modular pipeline for streamlined processing of cryo-electron tomographic data for subtomogram…☆29Jun 29, 2025Updated 10 months ago
- ☆76May 8, 2026Updated 2 weeks ago
- Detect and erase gold fiducials in cryo-EM images☆15May 27, 2025Updated 11 months ago
- PyTom software for cryo-tomogram processing☆45Jan 5, 2026Updated 4 months ago
- Scripts and Tools for Electron Microscopy Image Analysis.☆11Apr 13, 2026Updated last month
- A set of MATLAB wrapper scripts to help with pre-processing of tomography data.☆20Jan 23, 2026Updated 4 months ago
- ☆16Feb 4, 2017Updated 9 years ago
- Neural networks to analyze structural heterogeneity in cryo-electron sub-tomograms☆31Jul 17, 2025Updated 10 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Converts Dynamo tables to star files for coordinate import into RELION 4.0☆14Jul 25, 2023Updated 2 years ago
- A curated list of awesome computational cryo-ET methods.☆70Nov 23, 2025Updated 6 months ago
- ☆24May 19, 2026Updated last week
- Scripts to make cryo-electron tomography a bit easier☆15May 14, 2026Updated last week
- Pipeline for the automatic detection and segmentation of particles and cellular structures in 3D Cryo-ET data, based on deep learning (co…☆41Jan 30, 2024Updated 2 years ago
- a bidirectional interface between Dynamo and the Warp-RELION-M pipeline☆20Jul 28, 2023Updated 2 years ago
- ☆23Nov 15, 2025Updated 6 months ago
- STOPGAP is a MATLAB-based package for subtomogram averaging.☆38May 13, 2026Updated last week
- ☆56Aug 19, 2024Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆36Aug 7, 2024Updated last year
- ☆20Apr 13, 2026Updated last month
- PIP package of cryoCARE☆47Apr 2, 2024Updated 2 years ago
- A CLI tool to segment the lamella slab in cryo-ET volumes☆14Oct 21, 2024Updated last year
- GPU-accelerated template matching for cryo-ET☆59Apr 14, 2026Updated last month
- Very simple script for EPU users which adds beam tilt classes to the star file☆11Nov 3, 2023Updated 2 years ago
- Python scripts for easy RELION STAR file manipulation.☆26Mar 24, 2026Updated 2 months ago
- TomoNet is a GUI based pipeline package focusing on cryoET and STA data processing☆22Mar 12, 2026Updated 2 months ago
- A somewhat cleaned-up version of the TOM toolbox for electron tomography☆16Nov 26, 2016Updated 9 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- 3D-CTF correction for cryo-electron tomography☆29Nov 8, 2018Updated 7 years ago
- ☆15May 11, 2026Updated 2 weeks ago
- Makes RELION 3.1 Optics Groups from EPU AFIS data☆18May 8, 2023Updated 3 years ago
- Self-supervised deep learning for denoising and missing wedge reconstruction of cryo-ET tomograms☆54Jul 29, 2025Updated 9 months ago
- De novo analysis for cryo-electron tomography☆25Nov 8, 2024Updated last year
- Public release of Ptolemy package for automated targeting of Cryo-EM grids☆18Mar 9, 2025Updated last year
- Smart Parallel Automated Cryo Electron tomography☆24May 3, 2026Updated 3 weeks ago