🍦Icecream: a self-supervised framework for cryo-ET reconstruction
☆36Aug 27, 2026Updated this week
Alternatives and similar repositories for icecream
Users that are interested in icecream are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Rapid Cryo-ET Reconstruction via Transform-Localized Deep Learning☆21Aug 11, 2026Updated 2 weeks ago
- IsoNet at higher resolution☆39Jun 25, 2026Updated 2 months ago
- Self-supervised deep learning framework for CryoET analysis☆20Apr 11, 2026Updated 4 months ago
- ☆16Jun 1, 2026Updated 2 months ago
- ☆83Aug 19, 2026Updated last week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Live processing and real time reconstruction of cryo☆59Aug 7, 2026Updated 3 weeks ago
- GPU-accelerated template matching for cryo-ET☆65Aug 5, 2026Updated 3 weeks ago
- a tool for using surfaces to explore volumetric data in napari☆22Jun 13, 2026Updated 2 months ago
- Contextual Analysis Tools for cryoET and subtomogram averaging☆42Updated this week
- ☆13May 22, 2025Updated last year
- ☆19Jan 23, 2026Updated 7 months ago
- ☆19Mar 20, 2026Updated 5 months ago
- learns to improve tilt-series alignment by making it worse☆34Aug 17, 2026Updated last week
- Miscellaneous scripts for processing cryo-ET data☆23Jul 29, 2026Updated last month
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆28Jun 29, 2026Updated 2 months ago
- ☆44Updated this week
- A CLI tool to segment the lamella slab in cryo-ET volumes☆16Jul 6, 2026Updated last month
- Scripts to make cryo-electron tomography a bit easier☆15Aug 7, 2026Updated 3 weeks ago
- STOPGAP is a MATLAB-based package for subtomogram averaging.☆40Jun 5, 2026Updated 2 months ago
- Two-Dimensional Template Matching implemented in Python☆16Updated this week
- ☆38Aug 7, 2024Updated 2 years ago
- cryo-ET workflow☆11Aug 20, 2026Updated last week
- modular Python packages for cryo-EM and cryo-ET☆22Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- a bidirectional interface between Dynamo and the Warp-RELION-M pipeline☆21Jul 28, 2023Updated 3 years ago
- A set of MATLAB wrapper scripts to help with pre-processing of tomography data.☆21Jun 2, 2026Updated 2 months ago
- PIP package of cryoCARE☆46Apr 2, 2024Updated 2 years ago
- ☆28Aug 19, 2026Updated last week
- Python scripts to manipulate Relion tomo STAR files and much more...☆15Mar 23, 2026Updated 5 months ago
- ☆57Aug 19, 2024Updated 2 years ago
- Anisotropic correction of beam induced sample motion for cryo-electron microscopy and tomography☆62Oct 3, 2025Updated 10 months ago
- Official repo for FunkNN: Neural Interpolation for Functional Generation☆11May 12, 2023Updated 3 years ago
- Complementary tools for Relion tomo☆12Mar 9, 2024Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A possible schema for cryoET geometry metadata☆12Aug 11, 2025Updated last year
- Fourier analysis and subtomogram averaging of heterogenic cylindrical structures☆17Updated this week
- TomoNet is a GUI based pipeline package focusing on cryoET and STA data processing☆22Mar 12, 2026Updated 5 months ago
- "Fast and accurate protein stoichiometry prediction"☆14Mar 20, 2026Updated 5 months ago
- Self-supervised deep learning for denoising and missing wedge reconstruction of cryo-ET tomograms☆56Jul 29, 2025Updated last year
- Conventions for 3DEM software packages☆19Feb 22, 2022Updated 4 years ago
- GPU accelerated software package for CTF estimation of cryoEM micrographs and cryoET tilt series☆25Jul 29, 2026Updated last month