alan-turing-institute / affinity-vae
Self-supervised method for disentanglement, clustering and classification of objects in multidimensional image data
☆13Updated last month
Related projects: ⓘ
- ☆10Updated 3 months ago
- A tool to support interactive machine learning for cryoET data☆10Updated 3 weeks ago
- Jupyter-based tool for membrane segmentation manipulation☆9Updated 4 months ago
- Image processing for cryo-electron microscopy in PyTorch☆14Updated 3 months ago
- Read MRC format image files into napari using the mrcfile package from CCP-EM☆18Updated 4 months ago
- Phantom generator☆18Updated 2 weeks ago
- Graph Representation Analysis for Connected Embeddings☆34Updated 9 months ago
- Singularity image for cryo-CARE☆26Updated 2 years ago
- ☆14Updated last week
- Algorithms for Single Particle Reconstruction☆46Updated this week
- ☆11Updated 7 months ago
- Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.☆23Updated 3 weeks ago
- De novo analysis for cryo-electron tomography☆19Updated 5 months ago
- Morphometrics for Membrane Surfaces Segmented from Cryo-ET or other volumetric imaging.☆18Updated 2 months ago
- Next generation of SuRVoS☆9Updated 11 months ago
- repository of notebooks for cryoEM☆12Updated 4 years ago
- A Modular Platform for Streamlining Automated Cryo-FIB Workflows☆19Updated 3 months ago
- cryo-EM tomogram simulator☆19Updated this week
- ☆17Updated 2 months ago
- Cryo-EM micrograph segmentation through deep learning☆19Updated last week
- ☆29Updated last year
- Pipeline for the automatic detection and segmentation of particles and cellular structures in 3D Cryo-ET data, based on deep learning (co…☆29Updated 7 months ago
- ☆10Updated last month
- Scripts for aligning cryo-electron microscopy direct electron detector movies on whole movies or individual particle trajectories☆11Updated 7 years ago
- Deep Learning for Scientific Image Analysis☆11Updated 3 months ago
- Generates synthetic datasets for Cryo-Electron Tomography☆19Updated last month
- Source code for "Unsupervised Object Representation Learning using Translation and Rotation Group Equivariant VAE," in pytorch. NeurIPS 2…☆17Updated last year
- Contextual Analysis Tools for cryoET and subtomogram averaging☆18Updated 2 weeks ago
- Speed up coding/extending image analysis in Python.☆30Updated this week
- A 3D interactivity toolbox for napari☆32Updated last month