Alternatives and similar repositories for dlsia

Users that are interested in dlsia are comparing it to the libraries listed below

• bionanopatterning / scNodes
  ☆14Updated 3 months ago
• alisterburt / napari-mrcfile-reader
  Read MRC format image files into napari using the mrcfile package from CCP-EM
  ☆19Updated last year
• NIEHS / SmartScope
  SmartScope is a framework for systematic evaluation of cryo-EM specimens
  ☆17Updated 9 months ago
• DeMarcoLab / fibsem
  A universal API for FIBSEM control
  ☆30Updated 7 months ago
• r-karimi / vesicle-picker
  A program interfacing Segment Anything with cryoSPARC via cryosparc-tools to efficiently identify vesicle-embedded membrane proteins and …
  ☆12Updated 11 months ago
• sklumpe / SerialFIB
  A Modular Platform for Streamlining Automated Cryo-FIB Workflows
  ☆25Updated 10 months ago
• teamtomo / libtilt
  Image processing for cryo-electron microscopy in PyTorch
  ☆13Updated 9 months ago
• cryoem-uoft / cryosparc2_public
  CryoSPARC is the state-of-the-art platform used globally for obtaining 3D structural information from single particle cryo-EM data. The …
  ☆13Updated 5 months ago
• cellcanvas / surforama
  a tool for using surfaces to explore volumetric data in napari
  ☆19Updated 8 months ago
• brisvag / blik
  Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.
  ☆28Updated last month
• GrotjahnLab / surface_morphometrics
  Morphometrics for Membrane Surfaces Segmented from Cryo-ET or other volumetric imaging.
  ☆31Updated this week
• teamtomo / mdocfile
  SerialEM mdoc files as pandas dataframes
  ☆14Updated 6 months ago
• KosinskiLab / colabseg
  Jupyter-based tool for membrane segmentation manipulation
  ☆10Updated 6 months ago
• SMLC-NYSBC / TARDIS
  Transformer And Rapid Dimensionless Instance Segmentation
  ☆18Updated last month
• juglab / cryoCARE_T2T
  Singularity image for cryo-CARE
  ☆37Updated 4 years ago
• ccpem / affinity-vae
  Self-supervised method for disentanglement, clustering and classification of objects in multidimensional image data
  ☆16Updated last year
• ZauggGroup / DeePiCt
  Pipeline for the automatic detection and segmentation of particles and cellular structures in 3D Cryo-ET data, based on deep learning (co…
  ☆39Updated 2 years ago
• instamatic-dev / instamatic
  Python program for automated electron diffraction data collection
  ☆59Updated 2 weeks ago
• basf / pyTEM
  Control and Automation of Transmission Electron Microscopes
  ☆13Updated 3 years ago
• teamtomo / membrain-seg
  membrane segmentation in 3D for cryo-ET
  ☆85Updated 2 months ago
• jianglab / motioncorr
  motion correction for movies recorded using direct electron detectors
  ☆14Updated 8 years ago
• anmartinezs / pyseg_system
  De novo analysis for cryo-electron tomography
  ☆24Updated last year
• AMCLab / TemGymBasic
  ☆30Updated last year
• mastcu / SerialEM
  ☆13Updated this week
• spider-em / SPIDER
  SPIDER (System for Processing Image Data from Electron microscopy and Related fields) is an image processing system for electron microsc…
  ☆20Updated last month
• DeMarcoLab / autolamella
  autolamella is a python package for automated cryo-lamella preparation with focused ion beam milling.
  ☆19Updated 6 months ago
• hanjinliu / cylindra
  Fourier analysis and subtomogram averaging of heterogenic cylindrical structures
  ☆16Updated last week
• cryoem-uoft / cryosparc-tools
  Python library that enables scripting access to CryoSPARC, a cryo-EM software package.
  ☆44Updated this week
• bionanopatterning / Ais
  ☆25Updated last month
• CellArchLab / MemBrain-v2
  This is the main repository for MemBrain v2. It includes MemBrain-seg, MemBrain-pick, MemBrain-stats, and several Napari tools.
  ☆20Updated last year