The code for GIMLET: A Unified Graph-Text Model for Instruction-Based Molecule Zero-Shot Learning
☆66Feb 22, 2024Updated 2 years ago
Alternatives and similar repositories for GIMLET
Users that are interested in GIMLET are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Multi-modal Molecule Structure-text Model for Text-based Editing and Retrieval, Nat Mach Intell 2023 (https://www.nature.com/articles/s42…☆253Jun 27, 2025Updated 9 months ago
- ☆24Oct 11, 2022Updated 3 years ago
- This is the code of our work CISS Certified Robustness Against Natural Language Attacks by Causal Intervention published on ICML 2022☆11Dec 6, 2022Updated 3 years ago
- This is the code of our work Are More Layers Beneficial to Graph Transformers? published on ICLR 2023.☆21May 27, 2023Updated 2 years ago
- Implementation of Fragment-based Pretraining and Finetuning on Molecular Graphs (NeurIPS 2023)☆23Jun 10, 2024Updated last year
- Deploy open-source AI quickly and easily - Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Code implementation for paper "Can Large Language Models Empower Molecular Property Prediction?"☆39Jul 14, 2023Updated 2 years ago
- Code for "Unifying Molecular and Textual Representations via Multi-task Language Modelling" @ ICML 2023☆46Sep 9, 2024Updated last year
- Repository for AAAI 2024 paper "MolTailor: Tailoring Chemical Molecular Representation to Specific Tasks via Text Prompts"☆23Apr 20, 2024Updated last year
- [NeurIPS 2024] Implementation of "Enhancing Graph Transformers with Hierarchical Distance Structural Encoding"☆16May 19, 2025Updated 11 months ago
- Code for EMNLP2023 paper "MolCA: Molecular Graph-Language Modeling with Cross-Modal Projector and Uni-Modal Adapter".☆85Feb 25, 2024Updated 2 years ago
- GeoSSL: Molecular Geometry Pretraining with SE(3)-Invariant Denoising Distance Matching, ICLR'23 (https://openreview.net/forum?id=CjTHVo1…☆47Jul 27, 2023Updated 2 years ago
- A Group Symmetric Stochastic Differential Equation Model for Molecule Multi-modal Pretraining, ICML'23☆35Mar 29, 2024Updated 2 years ago
- Code and data for the Nature Machine Intelligence paper "Knowledge graph-enhanced molecular contrastive learning with functional prompt".☆136Mar 18, 2024Updated 2 years ago
- Source code for "A Deep-learning System Bridging Molecule Structure and Biomedical Text with Comprehension Comparable to Human Profession…☆90Sep 6, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- [ECCV 2022] Contrastive Prototypical Network with Wasserstein Confidence Penalty☆11Oct 20, 2022Updated 3 years ago
- A quantitative benchmark and analysis of molecular large language models.☆19Jun 3, 2025Updated 10 months ago
- [ICLR 2024] Mol-Instructions: A Large-Scale Biomolecular Instruction Dataset for Large Language Models☆293Oct 28, 2024Updated last year
- Part of official implementation of "Natural language-informed learning of molecule graphs"☆18Jul 17, 2023Updated 2 years ago
- LLM for Drug Editing, ICLR 2024☆161May 28, 2024Updated last year
- Few-shot Classification with LS-SVM Base Learner and Transductive Modules☆11Jan 22, 2021Updated 5 years ago
- [NeurIPS 2023] "Rethinking Tokenizer and Decoder in Masked Graph Modeling for Molecules"☆41Mar 16, 2024Updated 2 years ago
- Code for the paper Enhancing Activity Prediction Models in Drug Discovery with the Ability to Understand Human Language☆113Feb 26, 2026Updated last month
- [ICLR 2024] MARCEL: Machine Learning over Molecular Conformer Ensembles☆45Jun 14, 2023Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- The PyTorch implementation of MoMu, described in "Natural Language-informed Modeling of Molecule Graphs".☆29Jul 17, 2023Updated 2 years ago
- Code for ICLR'24 Paper "Decoupling Weighing and Selecting for Integrating Multiple Graph Pre-training Tasks"☆10Mar 12, 2024Updated 2 years ago
- Code and Data for the paper: Graph Sampling-based Meta-Learning for Molecular Property Prediction [IJCAI2023]☆20Jun 29, 2023Updated 2 years ago
- Geom3D: Geometric Modeling on 3D Structures, NeurIPS 2023☆130Jun 5, 2024Updated last year
- ☆38Jul 5, 2024Updated last year
- ☆14Mar 2, 2023Updated 3 years ago
- Large Language Models in Molecular Embeddings☆12May 1, 2024Updated last year
- This is the official implementation of "Motif-based Graph Representation Learning with Application to Chemical Molecules".☆11Feb 10, 2023Updated 3 years ago
- ☆28Sep 9, 2025Updated 7 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Code for AAAI24 paper Text-Guided Molecule Generation with Diffusion Language Model☆31Jun 24, 2025Updated 9 months ago
- Official Repo of SimTeG☆43Mar 29, 2024Updated 2 years ago
- ☆170Feb 28, 2022Updated 4 years ago
- Code of "Instruction Multi-Constraint Molecular Generation Using a Teacher-Student Large Language Model"☆14Jul 8, 2025Updated 9 months ago
- Code for EMNLP2023 paper "MolCA: Molecular Graph-Language Modeling with Cross-Modal Projector and Uni-Modal Adapter".☆12Dec 27, 2023Updated 2 years ago
- Gene expression time-series extrapolation for heterogeneous data☆20Apr 29, 2023Updated 2 years ago
- SSM-DTA: Breaking the Barriers of Data Scarcity in Drug-Target Affinity Prediction (Briefings in Bioinformatics 2023)☆56May 28, 2024Updated last year