linjc16 / R2-DDIView external linksLinks
[BIB 2023] Official implementation of "R2-DDI: Relation-aware Feature Refinement for Drug-drug Interaction Prediction".
☆13Mar 18, 2024Updated last year
Alternatives and similar repositories for R2-DDI
Users that are interested in R2-DDI are comparing it to the libraries listed below
Sorting:
- [RECOMB 2023] Official implementation of "Pisces: A combo-wise contrastive learning approach to synergistic drug combination prediction".☆14Nov 21, 2023Updated 2 years ago
- ☆11Jun 4, 2021Updated 4 years ago
- ☆24Aug 7, 2023Updated 2 years ago
- ☆30Feb 17, 2024Updated last year
- [ICLR24] Better Neural PDE Solvers Through Data-Free Mesh Movers☆17Mar 20, 2024Updated last year
- ☆17Jun 3, 2024Updated last year
- related to graph and deep Learning for drug-drug interactions prediction.☆29Mar 4, 2023Updated 2 years ago
- Official implementation of Panacea: A foundation model for clinical trial design, recruitment, search, and summarization.☆17Dec 24, 2024Updated last year
- source for paper DGNN-DDI☆11Oct 8, 2023Updated 2 years ago
- SSM-DTA: Breaking the Barriers of Data Scarcity in Drug-Target Affinity Prediction (Briefings in Bioinformatics 2023)☆55May 28, 2024Updated last year
- ☆32Jun 17, 2021Updated 4 years ago
- Serializing molecule 3D structures☆14Nov 27, 2024Updated last year
- A geometric deep learning method for refining and assessing protein complex structures.☆16Oct 22, 2022Updated 3 years ago
- ☆14Jun 22, 2022Updated 3 years ago
- ☆17Aug 31, 2022Updated 3 years ago
- Awesome Long-CoT Data☆18Mar 26, 2025Updated 10 months ago
- The official implementation of dual-view molecule pre-training.☆43Nov 22, 2021Updated 4 years ago
- This repository collects various works that reproduce DeepSeek R1, as well as works related to DeepSeek R1 and the DeepSeek series.☆19Apr 27, 2025Updated 9 months ago
- Gene expression time-series extrapolation for heterogeneous data☆19Apr 29, 2023Updated 2 years ago
- Codes, datasets and appendix for AAAI-2023 paper "Multi-relational Contrastive Learning Graph Neural Network for Drug-drug Interaction Ev…☆18Feb 24, 2025Updated 11 months ago
- ☆95Aug 8, 2023Updated 2 years ago
- PyTorch code for KDD 2023 paper "Pre-training Antibody Language Models for Antigen-Specific Computational Antibody Design"☆55Nov 14, 2023Updated 2 years ago
- Source Code for IJCAI'20 "KGNN: Knowledge Graph Neural Network for Drug-Drug Interaction Prediction"☆93Feb 11, 2021Updated 5 years ago
- CASTER: Predicting Drug Interactions with Chemical Substructure Representation (AAAI 2020)☆25Oct 28, 2020Updated 5 years ago
- MathFusion: Enhancing Mathematical Problem-solving of LLM through Instruction Fusion (ACL 2025)☆35Jul 16, 2025Updated 6 months ago
- Unified 2D and 3D Pre-Training of Molecular Representations☆30Jun 30, 2022Updated 3 years ago
- ☆27Oct 7, 2024Updated last year
- ☆40Apr 10, 2025Updated 10 months ago
- ☆74Oct 21, 2023Updated 2 years ago
- A bi-directional attention neural network for compound–protein interaction and binding affinity prediction.☆33Dec 1, 2022Updated 3 years ago
- [Bioinformatics 2021] This is the repo for the paper `SumGNN: Multi-typed Drug Interaction Prediction via Efficient Knowledge Graph Summa…☆88Jul 25, 2024Updated last year
- Enhancer-promoter interaction model☆10Nov 28, 2022Updated 3 years ago
- Tool for generation and visualization of 4D trajectories (latitude, longitude, altitude, speed) between any two airports in the world.☆14Aug 30, 2025Updated 5 months ago
- ☆10Nov 30, 2022Updated 3 years ago
- Atom-in-SMILES tokenizer for SMILES strings.☆42Jul 29, 2024Updated last year
- Scripts to benchmark and train foldseek☆41May 22, 2024Updated last year
- [ICLR 2024] MARCEL: Machine Learning over Molecular Conformer Ensembles☆44Jun 14, 2023Updated 2 years ago
- Encoder-decoders for translating different chemical formats.☆18Sep 17, 2025Updated 4 months ago
- Code of "Instruction Multi-Constraint Molecular Generation Using a Teacher-Student Large Language Model"☆14Jul 8, 2025Updated 7 months ago