WLYLab / PepFormerLinks
☆12Updated 4 years ago
Alternatives and similar repositories for PepFormer
Users that are interested in PepFormer are comparing it to the libraries listed below
Sorting:
- [Nat. Commun.] Code for paper 'Attention-based multi-label neural networks for integrated prediction and interpretation of twelve widely …☆30Updated 3 years ago
- ☆13Updated 2 years ago
- ☆17Updated 3 years ago
- ☆34Updated 4 years ago
- Source code for "A novel methodology on distributed representations of proteins using their interacting ligands"☆28Updated 5 years ago
- NLP for Proteins - A paper collection☆13Updated 4 years ago
- Source code for ICLR 2021 paper: "Molecule Optimization by Explainable Evolution"☆30Updated 4 years ago
- Easy & Pretrained SOTA Deep Learning for RNA strings☆12Updated 3 years ago
- A tool for predicting the effects of missense mutations on protein stability changes upon missense mutation using protein sequence only. …☆22Updated 2 years ago
- ☆17Updated 5 years ago
- Linear-Time Approximation of RNA Folding Partition Function and Base Pairing Probabilities☆30Updated last year
- Homology reduced UniProt, train-/valid-/testsets for language modeling☆17Updated 3 years ago
- Code for "Learning Harmonic Molecular Representations on Riemannian Manifold", ICLR, 2023☆10Updated 2 years ago
- A geometric deep learning framework (Geometric Transformers) for predicting protein interface contacts. (ICLR 2022)☆64Updated 3 years ago
- ☆18Updated 5 years ago
- ☆12Updated 2 years ago
- An official implementation of Protein Representation Learning via Knowledge Enhanced Primary Structure Reasoning☆28Updated last year
- Exploring Evolution-aware & free protein language models as protein function predictors☆63Updated 8 months ago
- ☆21Updated 11 months ago
- Multi-Channel Deep Chemogenomic Modeling of Receptor-Ligand Binding Affinity Prediction for Drug Discovery☆28Updated 4 years ago
- PyTorch implementation of "TGSA: Protein-Protein Association-Based Twin Graph Neural Networks for Drug Response Prediction with Similarit…☆24Updated 3 years ago
- ☆12Updated 7 months ago
- Amino Acid Embedding Representation as Machine Learning Features☆19Updated 6 years ago
- The official code implementation for DREAMwalk in Python.☆21Updated last year
- DeepGraphGO: graph neural network for large-scale, multispecies protein function prediction☆35Updated 3 years ago
- Official implementation for the paper "EBMDOCK: NEURAL PROBABILISTIC PROTEIN-PROTEIN DOCKING VIA A DIFFERENTIABLE ENERGY-BASED MODEL" (IC…☆13Updated last year
- Prediction of Protein-Small molecule binding affinities☆17Updated 8 months ago
- Unsupervised neural network for learning embeddings of GO terms.☆18Updated 3 years ago
- LoRA for protein language models☆38Updated last year
- Code for ICML 2023 paper "Reprogramming Pretrained Language Models for Antibody Sequence Infilling"☆24Updated last year