Alternatives and similar repositories for MagicDNA

Users that are interested in MagicDNA are comparing it to the libraries listed below

• Luthey-Schulten-Lab / Minimal_Cell
  ☆102Updated 3 years ago
• douglaslab / cadnano2
  Cadnano2
  ☆60Updated 11 months ago
• Luthey-Schulten-Lab / Lattice_Microbes
  ☆34Updated 7 months ago
• sulcgroup / oxdna-viewer
  oxView: Visualization and editing tool for DNA/RNA nanotechnology and oxDNA/oxRNA configuration analysis
  ☆54Updated 3 weeks ago
• omnia-md / omnia-md
  ☆12Updated 11 years ago
• lcbb / athena
  A GUI for automated sequence design of wireframe scaffolded DNA origami
  ☆14Updated 4 years ago
• UC-Davis-molecular-computing / scadnano-python-package
  Python scripting library for generating designs readable by scadnano.
  ☆16Updated this week
• Frost-group / LeadCopperApatite
  Modelling the new Lead-Copper apatite proposed room temperature supeconductor
  ☆32Updated 2 years ago
• croningp / ChemputerSoftware
  Software for running the Chemputer in association with the supporting publication in Science
  ☆102Updated 3 years ago
• klavinslab / gro
  The gro bacterial micro-colony growth specification and simulation software. For more information see the gro website, listed below.
  ☆52Updated 4 years ago
• TimothyStiles / how-to-synbio
  The resources I always recommend to new synthetic biologists.
  ☆83Updated 4 years ago
• NVIDIA-Digital-Bio / la-proteina
  A partially latent flow matching model for the joint generation of a protein’s amino acid sequence and full atomistic structure, includin…
  ☆265Updated 4 months ago
• BuildACell / bioCRNpyler
  A modular compiler for biological chemical reaction networks
  ☆49Updated 2 months ago
• jonathanking / protein-transformer
  Predicting protein structure through sequence modeling
  ☆112Updated 5 years ago
• timduignan / Scalable-Electrolyte-Simulation
  This repository contains the data and scripts necessary to reproduce the results presented in the paper: **"Scalable molecular simulation…
  ☆48Updated last year
• 20n / act
  Computational synthetic biology: Predicting DNA edits for bioengineering
  ☆90Updated 8 years ago
• rrtucci / Entanglish
  python toolbox for calculations related to quantum entanglement (including squashed entanglement) "Speak Quantum Friend and Enter"
  ☆14Updated 5 years ago
• usnistgov / pysr
  a pure-python symbolic regression library built on deap
  ☆10Updated 9 years ago
• chaitjo / alphafold3
  Hackable AlphaFold 3 inference pipeline.
  ☆33Updated 7 months ago
• msohaibalam / Link_to_Quantum_game
  A quantum video game!
  ☆34Updated 7 years ago
• cando-developers / cando
  Cando chemistry language
  ☆183Updated 3 weeks ago
• whitead / minimalaf
  Minimal AlphaFold
  ☆56Updated last year
• AndrewGYork / gfp_magnetofluorescence
  A scientific publication that describes a simple, nontoxic, biocompatible way to control the brightness of fluorescent proteins via modes…
  ☆23Updated last year
• RobinKa / jaxga
  Geometric Algebra package for JAX
  ☆55Updated 4 years ago
• lcbb / PERDIX
  Designer scaffolded DNA DX-based wireframe lattices
  ☆14Updated 7 years ago
• RuleWorld / bionetgen
  Rule-based modeling framework
  ☆66Updated 8 months ago
• OpenBioML / project-proposal-template
  The project proposal template for OpenBioML community projects.
  ☆18Updated 3 years ago
• graphcore / ogb-lsc-pcqm4mv2
  The OGB-LSC is the Large Scale Competition by Open Graph Benchmark to help accelerate research into machine learning on graph structured …
  ☆79Updated last year
• thethoughtemporium / Intro-To-Genetic-Engineering
  ☆83Updated 2 years ago
• jgreener64 / pdb-benchmarks
  Benchmarking common tasks on proteins in various languages and packages
  ☆42Updated 5 years ago