Alternatives and similar repositories for MagicDNA

Users that are interested in MagicDNA are comparing it to the libraries listed below

• douglaslab / cadnano2
  Cadnano2
  ☆56Updated 6 months ago
• Luthey-Schulten-Lab / Minimal_Cell
  ☆103Updated 2 years ago
• Luthey-Schulten-Lab / Lattice_Microbes
  ☆32Updated last month
• sulcgroup / oxdna-viewer
  oxView: Visualization and editing tool for DNA/RNA nanotechnology and oxDNA/oxRNA configuration analysis
  ☆54Updated this week
• BuildACell / bioCRNpyler
  A modular compiler for biological chemical reaction networks
  ☆47Updated this week
• lcbb / athena
  A GUI for automated sequence design of wireframe scaffolded DNA origami
  ☆14Updated 3 years ago
• omnia-md / omnia-md
  ☆12Updated 10 years ago
• croningp / ChemputerSoftware
  Software for running the Chemputer in association with the supporting publication in Science
  ☆100Updated 3 years ago
• openworm / c302
  The c302 framework for generating multiscale network models of C. elegans
  ☆124Updated last month
• klavinslab / gro
  The gro bacterial micro-colony growth specification and simulation software. For more information see the gro website, listed below.
  ☆52Updated 4 years ago
• TimothyStiles / how-to-synbio
  The resources I always recommend to new synthetic biologists.
  ☆81Updated 3 years ago
• jgreener64 / pdb-benchmarks
  Benchmarking common tasks on proteins in various languages and packages
  ☆42Updated 4 years ago
• OpenBioML / project-proposal-template
  The project proposal template for OpenBioML community projects.
  ☆18Updated 2 years ago
• wwpdb-dictionaries / mmcif_pdbx
  wwPDB PDBx/mmCIF Dictionary
  ☆10Updated this week
• jonathanking / protein-transformer
  Predicting protein structure through sequence modeling
  ☆111Updated 5 years ago
• UC-Davis-molecular-computing / scadnano-python-package
  Python scripting library for generating designs readable by scadnano.
  ☆16Updated last week
• google-deepmind / nuclease_design
  ML-guided enzyme engineering
  ☆65Updated 2 weeks ago
• ashvardanian / usearch-molecules
  Searching for structural similarities across billions of molecules in milliseconds
  ☆88Updated last year
• betsee / betse
  BETSE — Bioelectric Tissue Simulation Engine
  ☆76Updated 4 months ago
• chaitjo / alphafold3
  Hackable AlphaFold 3 inference pipeline.
  ☆34Updated 2 months ago
• cando-developers / cando
  Cando chemistry language
  ☆176Updated last week
• lidawei1975 / deep
  ANN based NMR peak picker
  ☆20Updated last month
• 20n / act
  Computational synthetic biology: Predicting DNA edits for bioengineering
  ☆88Updated 8 years ago
• RuleWorld / bionetgen
  Rule-based modeling framework
  ☆64Updated 3 months ago
• Global-Chem / global-chem
  A Knowledge Graph of Common Chemical Names to their Molecular Definition
  ☆168Updated 7 months ago
• felixjwong / antibioticsai
  Supporting code for the paper "Discovery of a structural class of antibiotics with explainable deep learning"
  ☆101Updated last year
• MyersResearchGroup / iBioSim
  iBioSim is a computer-aided design (CAD) tool aimed for the modeling, analysis, and design of genetic circuits. It is capable of importin…
  ☆61Updated 9 months ago
• marko-vasic / crnPlusPlus
  Implementation of a first imperative molecular programming language (CRN++)
  ☆74Updated 3 years ago
• Frost-group / LeadCopperApatite
  Modelling the new Lead-Copper apatite proposed room temperature supeconductor
  ☆32Updated 2 years ago
• croningp / assemblyphysics
  ☆51Updated last year