MHMAILab / auto_lymph
Predicting gastric cancer outcome from resected lymph node histopathology images using deep learning
☆32Updated 3 years ago
Related projects ⓘ
Alternatives and complementary repositories for auto_lymph
- Re-stained whole slide image alignment☆31Updated last year
- Radiopathomics: a framework of fusing multi-scale images information to enrich description of tumor heterogeneity for LARC patients prior…☆21Updated 3 years ago
- Code from Foersch et al. (Under Construction / Development)☆35Updated last year
- [The Lancet Digital Health, MICCAI2020 Oral] The official code of "Spatially-aware Graph Neural Networks and Cross-level Molecular Profil…☆25Updated last year
- Histomic Prognostic Signature (HiPS): A population-level computational histologic signature for invasive breast cancer prognosis☆18Updated 7 months ago
- ☆49Updated 2 years ago
- A biologically interpretable integrative deep learning model that integrates PAthological images and GEnomic data☆19Updated 4 years ago
- ☆45Updated last year
- Class for getting ROIs and masks from annotated pyramidal images. A work in progress.☆12Updated 3 years ago
- ☆15Updated 2 years ago
- Exploring prognostic indicators in pathological images of hepatocellular carcinoma based on deep learning☆41Updated 3 years ago
- ☆36Updated last year
- Solid Tumor Associative Modeling in Pathology☆47Updated 2 months ago
- Image filters for digital pathology: detect pen marks, background, and artifacts. Use them for preprocessing towards deep learning☆25Updated 4 years ago
- NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation☆46Updated 2 years ago
- Deep learning enabled assessment of cardiac allograft rejection from endomyocardial biopsies- Nature Medicine☆28Updated 2 years ago
- Multimodal deep learning to predict distant recurrence-free probability from digitized H&E tumour slide and tumour stage.☆32Updated 5 months ago
- ☆40Updated 2 years ago
- Histopathology Image Analysis☆91Updated last year
- Code for the im4MEC model described in the paper 'Interpretable deep learning model to predict the molecular classification of endometria…☆35Updated 9 months ago
- First commit☆58Updated 2 years ago
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆67Updated 2 years ago
- Data and code to accompany our Nature publication☆43Updated 2 years ago
- Artificial Intelligence predicts immune and inflammatory gene signatures directly from hepatocellular carcinoma histology images☆20Updated 4 months ago
- Histopathology Slides Preprocessing Pipeline☆32Updated 2 months ago
- ☆12Updated last year
- Implementation of LA_MIL, Local Attention Graph-based Transformer for WSIs, PyTorch☆23Updated last year
- GPU-accelerated stain normalization command line tool☆19Updated last year
- A Python package for handling histopathology whole-slide images using multiple instance learning (MIL) techniques.☆27Updated 6 months ago
- ☆43Updated last year