Robust and Efficient Lossless Compression of Quality Scores in FASTQ Files with Random Access Decompression Functionality
☆16Jun 3, 2020Updated 6 years ago
Alternatives and similar repositories for LCQS
Users that are interested in LCQS are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- HiGCN: a hierarchical graph convolution network for representation learning of gene expression data☆14Jan 24, 2021Updated 5 years ago
- experiments for Course 'Advanced Operation System'.☆13Mar 19, 2019Updated 7 years ago
- fastq quality assessment and filtering tool☆17Dec 10, 2022Updated 3 years ago
- Multi-view hierarchical clustering in R☆12Apr 24, 2024Updated 2 years ago
- ☆47Apr 6, 2017Updated 9 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- MONI: A Pangenomic Index for Finding MEMs☆37Mar 25, 2025Updated last year
- Experiments for "Scaling read aligners to hundreds of threads on general-purpose processors"☆11Jun 8, 2018Updated 8 years ago
- This repository contains the source code of JUDI, a workflow management system for developing complex bioinformatics software with many p…☆33Dec 23, 2021Updated 4 years ago
- Colorized cat command in Python. Uses Pygments to do automatic syntax highlighting.☆13Dec 12, 2019Updated 6 years ago
- ixgbe driver for Redox based on ixy.rs☆11Jul 30, 2019Updated 6 years ago
- A userspace tunnel between two hosts mapping ports on client machine to addresses reachable from server machine.☆18Feb 25, 2022Updated 4 years ago
- SALMON: Survival Analysis Learning with Multi-Omics Neural Networks☆68Oct 26, 2024Updated last year
- Fast, efficient, lossless compression of fastq files☆14Jan 4, 2021Updated 5 years ago
- ☆17Dec 9, 2019Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- De novo genome assembler.☆12Jul 30, 2018Updated 7 years ago
- A FASTQ lossless compression algorithm especially designed for nanopore sequencing FASTQ files.☆10Jul 2, 2020Updated 6 years ago
- ☆10Oct 17, 2019Updated 6 years ago
- ☆15May 16, 2019Updated 7 years ago
- Force Field X development has moved to the SchniedersLab area of GitHub.☆17Oct 4, 2019Updated 6 years ago
- Supplementary Material to accompany the paper, DJ Warne, SA Sisson, C Drovandi (2019) Acceleration of expensive computations in Bayesian…☆13Oct 23, 2020Updated 5 years ago
- Go port of wyhash v3☆14Nov 1, 2022Updated 3 years ago
- File parsing and writing code for Ensembl☆10Apr 9, 2026Updated 3 months ago
- Shiny ClinVar web server source code☆12Apr 29, 2019Updated 7 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- MONSDA, Modular Organizer of Nextflow and Snakemake driven hts Data Analysis☆12Jul 9, 2026Updated 2 weeks ago
- Generate command line parser using getopt_long☆16Dec 11, 2024Updated last year
- Build an index for your BAM Index (BAI)☆17Apr 14, 2015Updated 11 years ago
- Utilities to detect and profile `het-kmers`☆12Aug 5, 2024Updated last year
- elPrep reimplementations in C++ and Java, only for benchmark comparisons☆10Feb 13, 2023Updated 3 years ago
- NextSeq specific bcl2fastq2 wrapper.☆57Apr 15, 2021Updated 5 years ago
- Programs and documentation for the SAMSA pipeline, version 1.0☆16Dec 16, 2019Updated 6 years ago
- Simple distribute job scheduler for multiple servers with only SSH. No additions.☆10Dec 8, 2022Updated 3 years ago
- Sprinkle is a volume clustering utility based on RClone. It presents all the RClone available volumes as a single clustered volume. It su…☆21Jun 14, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- AUGUSTUS v3.2.1 for installation on Mac OS X☆12May 21, 2018Updated 8 years ago
- A python script to calculate the relative coverage of X and Y chromosomes, and their associated error bars, from the depth of coverage at…☆16May 2, 2023Updated 3 years ago
- Supplementary information to "Computational correction of index switching in multiplexed sequencing libraries" (Larsson et. al 2018).☆15Nov 3, 2020Updated 5 years ago
- ☆26Sep 8, 2020Updated 5 years ago
- DartMinHash: Fast Sketching for Weighted Sets☆12Dec 8, 2025Updated 7 months ago
- The Power of LaTeX, the Style of Markdown.☆12Sep 5, 2024Updated last year
- Vectorized intersections (research code)☆17Jan 13, 2017Updated 9 years ago