Alternatives and similar repositories for Arena3Dweb

Users that are interested in Arena3Dweb are comparing it to the libraries listed below

• geneontology / noctua
  Graph-based modeling environment for biology, including prototype editor and services
  ☆40Updated 3 weeks ago
• biolink / ontobio
  python library for working with ontologies and ontology associations
  ☆133Updated 10 months ago
• vsm / vsm-box
  Web-component for creating & showing VSM-sentences — Visual Syntax Method
  ☆30Updated 4 years ago
• upsetjs / upsetjs
  😠 UpSet.js - a set visualization library for rendering UpSet Plots (a JavaScript re-implementation of UpSet(R) by Lex et al), Euler Diag…
  ☆147Updated 2 years ago
• EBISPOT / ols4
  The EMBL-EBI Ontology Lookup Service (OLS)
  ☆75Updated this week
• INCATools / ontology-access-kit
  Ontology Access Kit: A python library and command line application for working with ontologies
  ☆156Updated 6 months ago
• biolink / kgx
  KGX is a Python library for exchanging Knowledge Graphs
  ☆136Updated last week
• monarch-initiative / curategpt
  LLM-driven curation assist tool
  ☆99Updated 2 months ago
• linkml / linkml-model
  Link Modeling Language (LinkML) model
  ☆60Updated 2 weeks ago
• graphia-app / graphia
  A visualisation tool for the creation and analysis of graphs
  ☆259Updated this week
• bmschmidt / pubmed-explorer
  Scrollership through 20m pubmed abstracts.
  ☆26Updated 2 years ago
• allysonlister / swo
  The Software Ontology (SWO) is a resource for describing software tools, their types, tasks, versions, licences, provenance and associate…
  ☆48Updated 2 years ago
• Rothamsted / knetminer
  KnetMiner - webapp to search and visualize genome-scale knowledge graphs
  ☆29Updated 3 months ago
• fusion-jena / computational-reproducibility-pmc
  ☆11Updated last year
• oborel / obo-relations
  RO is an ontology of relations for use with biological ontologies
  ☆106Updated last week
• RTXteam / RTX
  Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)
  ☆42Updated last week
• biolink / biolink-model
  Schema and generated objects for biolink data model and upper ontology
  ☆220Updated last week
• jamesaoverton / obo-tutorial
  A tutorial on using Open Biological and Biomedical Ontologies (OBO)
  ☆62Updated 6 years ago
• fhooton / FoodMine
  ☆23Updated 2 years ago
• visdesignlab / upset2
  UpSet - Visualizing Intersecting Sets
  ☆71Updated last week
• lubianat / ann
  A repository for brainstorming and prototyping ideas related to the eLifeSprint project Annotate them all (https://sprint.elifesciences.o…
  ☆15Updated 4 years ago
• prefixcommons / biocontext
  JSON-LD Contexts for Bioinformatics Data
  ☆23Updated last year
• biopragmatics / pyobo
  📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures
  ☆74Updated last week
• edamontology / edamontology
  EDAM is an ontology of data analysis and data management in bio- and other sciences, and science-based applications. It comprises concept…
  ☆134Updated last month
• bio-ontology-research-group / mowl
  mOWL: Machine Learning library with Ontologies
  ☆80Updated 2 months ago
• bio-ontology-research-group / ontology-tutorial
  Ontology Tutorial
  ☆73Updated 3 years ago
• iVis-at-Bilkent / newt
  A web application to visualize and edit pathway models
  ☆59Updated last week
• EBISPOT / OXO
  Ontology cross-reference and mapping service
  ☆20Updated 2 weeks ago
• bio-ontology-research-group / machine-learning-with-ontologies
  ☆130Updated 2 years ago
• cthoyt / doctoral-thesis
  📖 Generation and Applications of Knowledge Graphs in Systems and Networks Biology
  ☆30Updated 6 years ago