mmCIF Core Access Library
☆50Apr 12, 2026Updated last week
Alternatives and similar repositories for py-mmcif
Users that are interested in py-mmcif are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A lightweight pure python package for reading, writing and manipulating mmCIF files distributed by the wwPDB"☆38Oct 30, 2023Updated 2 years ago
- Python package for handling IHM mmCIF and BinaryCIF files☆18Updated this week
- A library to open/edit/save (crystallographic) Protein Data Bank (PDB) and mmCIF files in Rust.☆69Feb 23, 2026Updated last month
- Python package for handling ModelCIF mmCIF and BinaryCIF files☆13Updated this week
- BinaryCIF is a data format for storing text based CIF files using a more efficient binary encoding.☆31Oct 14, 2024Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Official code release for Ambient Protein Diffusion☆33Aug 30, 2025Updated 7 months ago
- A Java library for handling text and BinaryCIF files.☆13Jan 13, 2026Updated 3 months ago
- 📐 Symmetry-corrected RMSD in Python☆115Mar 30, 2026Updated 2 weeks ago
- Python interface for the RCSB PDB search API.☆66Mar 26, 2025Updated last year
- Library containing code to manipulate mmCIF and PDB files☆42Updated this week
- Generate customized voxel representations of protein-ligand complexes using GPU.☆11Sep 8, 2025Updated 7 months ago
- The pDynamo molecular modeling and simulation program☆47Nov 24, 2025Updated 4 months ago
- Protein ribbon plots implemented in Julia using Makie☆25Mar 30, 2026Updated 2 weeks ago
- Voronota is a software tool for analyzing three-dimensional structures of biological macromolecules using the Voronoi diagram of atomic b…☆40Apr 9, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Mol* as anywidget☆52Oct 13, 2025Updated 6 months ago
- Fragment Graphical Variational AutoEncoding for Screening and Generating Molecules☆14Nov 21, 2022Updated 3 years ago
- A python module for flexible Poisson-Boltzmann based pKa calculations with proton tautomerism☆68Mar 29, 2026Updated 3 weeks ago
- Python macromolecular parsing (with .pdb/.cif/.mmtf parsing and production)☆106Dec 7, 2023Updated 2 years ago
- ☆33Mar 30, 2026Updated 2 weeks ago
- PDBe Programming Interfaces information☆14Jul 23, 2018Updated 7 years ago
- PROPKA predicts the pKa values of ionizable groups in proteins and protein-ligand complexes based in the 3D structure.☆347Mar 21, 2026Updated 3 weeks ago
- Real-time structure motif searching in protein 3D structures using an inverted index strategy☆14Jul 19, 2025Updated 9 months ago
- ☆27Mar 13, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- PyGBe: Python, GPUs and Boundary elements for electrostatics☆70Aug 8, 2023Updated 2 years ago
- A Rust library for calculating the SASA for a protein. 5x faster than Freesasa. Based on the Shrake & Rupley algorithm.☆20Mar 16, 2026Updated last month
- substructure search in large combinatorial spaces using openchemlib☆23Mar 6, 2026Updated last month
- ☆11Sep 17, 2024Updated last year
- The first 100B protein language model from biomap☆23Mar 17, 2025Updated last year
- Library for prediction of cryptic binding sites☆25Aug 6, 2025Updated 8 months ago
- Program to find drug-like RNA-ligand binding pockets.☆24Mar 19, 2026Updated last month
- Script to facilitate the making of horizontal scripts☆18May 25, 2024Updated last year
- ☆23May 15, 2019Updated 6 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ☆20Jan 31, 2023Updated 3 years ago
- Read, write and manipulate atomic systems in PDB and mmCIF formats☆16Apr 2, 2026Updated 2 weeks ago
- Methods for mapping proteomics data on 3D protein structure.☆15Jan 18, 2020Updated 6 years ago
- Python libraries for Waveshare e-paper series☆12Jan 2, 2020Updated 6 years ago
- The Protein Feature View - a SVG library for visualising protein annotations☆13Sep 18, 2017Updated 8 years ago
- A generic mechanism for describing views used in molecular visualizations☆66Mar 1, 2026Updated last month
- Atomic Structure Generation from Reconstructing Structural Fingerprints☆15Oct 6, 2022Updated 3 years ago