rcsb / py-mmcifLinks
mmCIF Core Access Library
☆49Updated this week
Alternatives and similar repositories for py-mmcif
Users that are interested in py-mmcif are comparing it to the libraries listed below
Sorting:
- A lightweight pure python package for reading, writing and manipulating mmCIF files distributed by the wwPDB"☆38Updated 2 years ago
- View proteins and trajectories in the terminal☆113Updated 5 years ago
- Calculation of interatomic interactions in molecular structures☆118Updated last year
- ☆80Updated this week
- A set of python tools to deal with PDB chemical components definitions for small molecules, taken from the wwPDB Chemical Component Dicti…☆74Updated 3 months ago
- Python macromolecular parsing (with .pdb/.cif/.mmtf parsing and production)☆106Updated 2 years ago
- Code and resources for the EPSRC BioSimSpace project.☆78Updated 4 months ago
- A comprehensive toolkit for predicting free energies☆58Updated last year
- STORMM: Structure and TOpology Replica Molecular Mechanics☆82Updated 4 months ago
- Modeling with limited data☆60Updated last month
- Protein and nucleic acid validation service☆93Updated last year
- Software for biomolecular electrostatics and solvation calculations☆122Updated last year
- An application for configuring and running simulations with OpenMM☆76Updated 2 months ago
- A simple Python library to generate model peptides☆91Updated 5 years ago
- Python interface for the RCSB PDB search API.☆65Updated 9 months ago
- Modeling molecular ensembles with scalable data structures and parallel computing☆36Updated last week
- Library containing code to manipulate mmCIF and PDB files☆38Updated last week
- PENSA - a collection of python methods for exploratory analysis and comparison of biomolecular conformational ensembles.☆148Updated 11 months ago
- Make a bunch of molecules☆97Updated last year
- Sire Molecular Simulations Framework☆62Updated last week
- The repository pymolschortucts contains the a collection of shortcuts that are loaded on startup of PyMOL. These shortcuts enable websear…☆85Updated 4 months ago
- An interoperable Python framework for biomolecular simulation.☆141Updated last month
- ☆67Updated 8 months ago
- Library for computing dynamic non-covalent contact networks in proteins throughout MD Simulation☆137Updated 2 years ago
- Source code for HOLE program.☆37Updated last year
- ☆133Updated 9 years ago
- FreeSASA Python Module☆59Updated 5 months ago
- A Graph-Convolutional Deep Neural Network for predicting electrostatic potential surfaces☆95Updated 2 years ago
- Fast calculation of hydrogen-bond strengths and free energy of hydration of small molecules.☆93Updated last month
- BinaryCIF is a data format for storing text based CIF files using a more efficient binary encoding.☆29Updated last year