BCHSI / philter-deidstable1_mirror
UCSF Philter for UC
☆12Updated 10 months ago
Alternatives and similar repositories for philter-deidstable1_mirror:
Users that are interested in philter-deidstable1_mirror are comparing it to the libraries listed below
- ☆18Updated last year
- Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41…☆45Updated last year
- Weakly supervised medical named entity classification☆73Updated 2 years ago
- Expert-Curated Oncology Reports to Advance Language Model Inference☆28Updated last year
- Official Codes for "Publicly Shareable Clinical Large Language Model Built on Synthetic Clinical Notes"☆106Updated 8 months ago
- A Python Natural Language Processing Toolkit for Medical Text Generation☆78Updated this week
- ☆98Updated 3 years ago
- [In Development] An application to parse freetext inclusion criteria and produce a structured cohort definition that can be executed agai…☆67Updated 9 months ago
- FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…☆93Updated 10 months ago
- ☆59Updated last year
- Basic setup and easy to follow templates to interact and search CogStack for data analysts☆12Updated 2 months ago
- ☆54Updated 5 years ago
- A collection of papers on automated medical coding from free-texts☆139Updated 4 months ago
- Code repository for BEEP (Biomedical Evidence Enhanced Predictions) clinical outcome prediction system☆26Updated last year
- auto icd coding with prompt☆49Updated last year
- all scripts used in gatortron project☆116Updated last year
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆78Updated 2 years ago
- AmsterdamUMCdb - Freely Accessible ICU database. Please access our Open Access manuscript at https://doi.org/10.1097/CCM.0000000000004916☆176Updated 3 months ago
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆147Updated last year
- ✖️MEN - A Modular Toolkit for Cross-Lingual Medical Entity Normalization☆27Updated 4 months ago
- Transformers for Clinical NLP☆24Updated last week
- MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…☆76Updated last week
- We evaluate many models used for biomedical and clinical nlp tasks, and train new models that perform much better.☆160Updated 3 years ago
- System for Medical Concept Extraction and Linking☆402Updated 9 months ago
- MedTagger is a light weight clinical NLP system built upon Apache UIMA.☆67Updated last week
- Mapping the MIMIC-III database to the OMOP schema☆134Updated last year
- This python tool enables a variety of mappings of ICD codes (International Classification of Diseases) to different medical concepts with…☆33Updated 11 months ago
- Python Radiology Text Analysis System☆14Updated last year
- Code for the emrQA question answering dataset☆148Updated 3 years ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆80Updated last week