som-shahlab / meds_readerView external linksLinks
A high-performance database and Python reader interface for MEDS datasets
☆20Jan 26, 2026Updated 2 weeks ago
Alternatives and similar repositories for meds_reader
Users that are interested in meds_reader are comparing it to the libraries listed below
Sorting:
- [ICLR 2025] ACES: Automatic Cohort Extraction System for Event-Streams☆40Oct 1, 2025Updated 4 months ago
- The MEDS Decentralized Extensible Validation (MEDS-DEV) Benchmark: Establishing Reproducibility and Comparability in ML for Health☆36Nov 20, 2025Updated 2 months ago
- Schema definitions and Python types for Medical Event Data Standard, a standard for medical event data such as EHR and claims data☆98Nov 5, 2025Updated 3 months ago
- An updated version of eICU Benchmark with an updated problem definition on LoS and Decompensation tasks☆11Aug 12, 2021Updated 4 years ago
- A collection of resources and information for concrete skills that are helpful when pursuing a PhD in computer science (specifically in M…☆22Apr 18, 2023Updated 2 years ago
- Dataset and modelling infrastructure for modelling "event streams": sequences of continuous time, multivariate events with complex intern…☆115Jul 2, 2025Updated 7 months ago
- Training HuggingFace models on EHR data☆40Nov 2, 2025Updated 3 months ago
- ☆14Aug 9, 2024Updated last year
- ☆19Jul 30, 2024Updated last year
- FEMR (Framework for Electronic Medical Records) provides tooling for large-scale, self-supervised learning using electronic health record…☆161Jan 19, 2026Updated 3 weeks ago
- Verifying Facts in LLM-Generated Clinical Text with Electronic Health Records☆25Jan 2, 2026Updated last month
- Source code for a comprehensive analysis of MTL over EHR timeseries data.☆37Apr 11, 2023Updated 2 years ago
- Prompting Large Language Models for Zero-Shot Clinical Prediction with Structured Longitudinal Electronic Health Record Data☆28Jan 17, 2024Updated 2 years ago
- R Package: Augmented Inverse Probability Weighted (AIPW) Estimation for Average Causal Effect☆27Apr 5, 2025Updated 10 months ago
- sample code for our traffic4cast NeurIPS 2019 competition☆22Oct 4, 2021Updated 4 years ago
- ☆32Jan 28, 2025Updated last year
- Deep Generative Modelling of Patient Timelines using Electronic Health Records☆72Jun 17, 2025Updated 7 months ago
- 🏥🤖 Query MIMIC-IV medical data using natural language through Model Context Protocol (MCP). Transform healthcare research with AI-power…☆67Dec 19, 2025Updated last month
- A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)☆208Jun 6, 2025Updated 8 months ago
- Keras framework for autocovariance-based dimensionality reduction of time series data with deep neural networks.☆32Jan 24, 2018Updated 8 years ago
- Weak supervision methods for extracting real world evidence from EHRs☆34Apr 7, 2020Updated 5 years ago
- Clinically Adapted Model Enhanced from LLaMA☆89Sep 1, 2023Updated 2 years ago
- ☆11Nov 4, 2025Updated 3 months ago
- Some resources (books, paper, video and online courses) about ML,DL,DM☆12Mar 14, 2021Updated 4 years ago
- Custom Keras layers for implementing multi-dimensional recurrent neural networks (MDRNNs) described in Alex Graves's paper https://arxiv.…☆10Apr 27, 2020Updated 5 years ago
- Go package designed for making calls to the Communauto API and finding available cars☆10Aug 6, 2024Updated last year
- 机器学习(Machine Learning)、深度学习(Deep Learning)、对抗神经网络(GAN),图神经网络(GNN),NLP,大数据相关的发 展路书(roadmap), 并附海量源码(python,pytorch)带大家消化基本知识点,突破面试,完成从新手到合格…☆10Feb 25, 2020Updated 5 years ago
- These are the official datasets used on the Medicare.gov Hospital Compare Website provided by the Centers for Medicare & Medicaid Service…☆10Mar 12, 2018Updated 7 years ago
- Cell tracking for longitudinal calcium imaging recordings.☆14Dec 11, 2025Updated 2 months ago
- ☆10Nov 3, 2023Updated 2 years ago
- Microbenchmark testing Python, Numba, Mojo, Dart, C/gcc, Rust, Go, JavaScript, C#, Java, Kotlin, Pascal, Ruby, Haskell performance in Man…☆13Mar 26, 2025Updated 10 months ago
- TIDAL: Tool to Implement Developmental Analyses of Longitudinal data. An R Shiny app.☆14Aug 14, 2025Updated 6 months ago
- ☆47Oct 25, 2023Updated 2 years ago
- 🏥 ICU data with R 🏥☆55Sep 3, 2025Updated 5 months ago
- CIKM'24☆10Oct 26, 2024Updated last year
- Medical natural language parsing and utility library☆13Dec 10, 2025Updated 2 months ago
- A curated list of awesome Machine Learning frameworks, libraries and software. With repository stars⭐ and forks🍴☆17Feb 8, 2026Updated last week
- Convert SWRL rules to SHACL-SPARQL rules☆10Oct 2, 2018Updated 7 years ago
- SynthEHRella is a benchmarking package used for evaluating synthetic Electronic Health Records (EHR) data generation methods.☆12Sep 17, 2025Updated 4 months ago