Alternatives and similar repositories for nnDetection

Users that are interested in nnDetection are comparing it to the libraries listed below

• junyuchen245 / Transformer_for_medical_image_analysis
  A collection of papers about Transformer in the field of medical image analysis.
  ☆467Updated 2 years ago
• HiLab-git / PyMIC
  ☆354Updated last month
• google-deepmind / surface-distance
  Library to compute surface distance based performance metrics for segmentation tasks.
  ☆576Updated 6 months ago
• MrGiovanni / ModelsGenesis
  [MICCAI 2019 Young Scientist Award] [MEDIA 2020 Best Paper Award] Models Genesis
  ☆770Updated 2 months ago
• JoHof / lungmask
  Automated lung segmentation in CT
  ☆723Updated 2 months ago
• JJGO / UniverSeg
  UniverSeg: Universal Medical Image Segmentation
  ☆559Updated 2 years ago
• neheller / kits19
  The official repository of the 2019 Kidney and Kidney Tumor Segmentation Challenge
  ☆453Updated 2 years ago
• neheller / kits21
  The official repository of the 2021 Kidney and Kidney Tumor Segmentation Challenge
  ☆179Updated 2 years ago
• jeya-maria-jose / KiU-Net-pytorch
  Official Pytorch Code of KiU-Net for Image/3D Segmentation - MICCAI 2020 (Oral), IEEE TMI
  ☆387Updated 2 years ago
• ljwztc / CLIP-Driven-Universal-Model
  [ICCV 2023] CLIP-Driven Universal Model; Rank first in MSD Competition.
  ☆648Updated 6 months ago
• JunMa11 / SOTA-MedSeg
  SOTA medical image segmentation methods based on various challenges
  ☆1,625Updated last year
• assassint2017 / MICCAI-LITS2017
  liver segmentation using deep learning
  ☆426Updated 2 years ago
• JunMa11 / AbdomenCT-1K
  The official repository of "AbdomenCT-1K: Is Abdominal Organ Segmentation A Solved Problem?"
  ☆253Updated last year
• MIC-DKFZ / batchgenerators
  A framework for data augmentation for 2D and 3D image classification and segmentation
  ☆1,153Updated 5 months ago
• christianpayer / MedicalDataAugmentationTool-VerSe
  ☆178Updated 4 years ago
• MrGiovanni / AbdomenAtlas
  [NeurIPS 2023] AbdomenAtlas 1.0 (5,195 CT volumes + 9 annotated classes)
  ☆285Updated last month
• DeepRegNet / DeepReg
  Medical image registration using deep learning
  ☆600Updated 2 years ago
• anjany / verse
  Everything about the 'Large Scale Vertebrae Segmentation Challenge' @ MICCAI 2019-2020
  ☆239Updated 4 years ago
• yhygao / CBIM-Medical-Image-Segmentation
  A PyTorch framework for medical image segmentation
  ☆319Updated last year
• uci-cbcl / NoduleNet
  [MICCAI' 19] NoduleNet: Decoupled False Positive Reduction for Pulmonary Nodule Detection and Segmentation
  ☆215Updated 5 years ago
• adalca / medical-datasets
  tracking medical datasets, with a focus on medical imaging
  ☆872Updated 5 months ago
• BMEII-AI / RadImageNet
  RadImageNet, a pre-trained convolutional neural networks trained solely from medical imaging to be used as the basis of transfer learning…
  ☆411Updated last year
• junyuchen245 / ViT-V-Net_for_3D_Image_Registration_Pytorch
  Vision Transformer for 3D medical image registration (Pytorch)
  ☆335Updated 2 years ago
• Jingnan-Jia / segmentation_metrics
  A package to compute medical segmentation metrics.
  ☆173Updated last year
• MrGiovanni / SuPreM
  [ICLR 2024 Oral] Supervised Pre-Trained 3D Models for Medical Image Analysis (9,262 CT volumes + 25 annotated classes)
  ☆365Updated this week
• MIC-DKFZ / MedNeXt
  [MICCAI 2023] MedNeXt is a fully ConvNeXt architecture for 3D medical image segmentation.
  ☆431Updated 10 months ago
• frankkramer-lab / MIScnn
  A framework for Medical Image Segmentation with Convolutional Neural Networks and Deep Learning
  ☆420Updated 2 years ago
• Project-MONAI / MONAILabel
  MONAI Label is an intelligent open source image labeling and learning tool.
  ☆751Updated 3 weeks ago
• Project-MONAI / research-contributions
  Implementations of recent research prototypes/demonstrations using MONAI.
  ☆1,145Updated 4 months ago
• lescientifik / open_brats2020
  Top 10 brats 2020 Solution
  ☆174Updated 4 years ago