Alternatives and similar repositories for nnDetection

Users that are interested in nnDetection are comparing it to the libraries listed below

• JoHof / lungmask
  Automated lung segmentation in CT
  ☆711Updated this week
• google-deepmind / surface-distance
  Library to compute surface distance based performance metrics for segmentation tasks.
  ☆572Updated 4 months ago
• junyuchen245 / Transformer_for_medical_image_analysis
  A collection of papers about Transformer in the field of medical image analysis.
  ☆469Updated 2 years ago
• MrGiovanni / ModelsGenesis
  [MICCAI 2019 Young Scientist Award] [MEDIA 2020 Best Paper Award] Models Genesis
  ☆768Updated 2 weeks ago
• HiLab-git / PyMIC
  ☆352Updated 5 months ago
• anjany / verse
  Everything about the 'Large Scale Vertebrae Segmentation Challenge' @ MICCAI 2019-2020
  ☆233Updated 3 years ago
• neheller / kits21
  The official repository of the 2021 Kidney and Kidney Tumor Segmentation Challenge
  ☆178Updated 2 years ago
• JJGO / UniverSeg
  UniverSeg: Universal Medical Image Segmentation
  ☆554Updated last year
• MIC-DKFZ / batchgenerators
  A framework for data augmentation for 2D and 3D image classification and segmentation
  ☆1,139Updated 3 months ago
• JunMa11 / SOTA-MedSeg
  SOTA medical image segmentation methods based on various challenges
  ☆1,618Updated last year
• ljwztc / CLIP-Driven-Universal-Model
  [ICCV 2023] CLIP-Driven Universal Model; Rank first in MSD Competition.
  ☆643Updated 4 months ago
• uci-cbcl / NoduleNet
  [MICCAI' 19] NoduleNet: Decoupled False Positive Reduction for Pulmonary Nodule Detection and Segmentation
  ☆208Updated 5 years ago
• JunMa11 / AbdomenCT-1K
  The official repository of "AbdomenCT-1K: Is Abdominal Organ Segmentation A Solved Problem?"
  ☆248Updated last year
• MrGiovanni / AbdomenAtlas
  [NeurIPS 2023] AbdomenAtlas 1.0 (5,195 CT volumes + 9 annotated classes)
  ☆276Updated 4 months ago
• neheller / kits19
  The official repository of the 2019 Kidney and Kidney Tumor Segmentation Challenge
  ☆452Updated 2 years ago
• adalca / medical-datasets
  tracking medical datasets, with a focus on medical imaging
  ☆859Updated 3 months ago
• DeepRegNet / DeepReg
  Medical image registration using deep learning
  ☆591Updated 2 years ago
• christianpayer / MedicalDataAugmentationTool-VerSe
  ☆179Updated 4 years ago
• jeya-maria-jose / KiU-Net-pytorch
  Official Pytorch Code of KiU-Net for Image/3D Segmentation - MICCAI 2020 (Oral), IEEE TMI
  ☆383Updated 2 years ago
• yhygao / CBIM-Medical-Image-Segmentation
  A PyTorch framework for medical image segmentation
  ☆313Updated last year
• Jingnan-Jia / segmentation_metrics
  A package to compute medical segmentation metrics.
  ☆168Updated 11 months ago
• assassint2017 / MICCAI-LITS2017
  liver segmentation using deep learning
  ☆424Updated 2 years ago
• MrGiovanni / SuPreM
  [ICLR 2024 Oral] Supervised Pre-Trained 3D Models for Medical Image Analysis (9,262 CT volumes + 25 annotated classes)
  ☆353Updated this week
• frankkramer-lab / MIScnn
  A framework for Medical Image Segmentation with Convolutional Neural Networks and Deep Learning
  ☆414Updated 2 years ago
• jaeho3690 / LIDC-IDRI-Preprocessing
  This is the preprocessing step of the LIDC-IDRI dataset
  ☆188Updated last year
• MIC-DKFZ / MedNeXt
  [MICCAI 2023] MedNeXt is a fully ConvNeXt architecture for 3D medical image segmentation.
  ☆415Updated 8 months ago
• Project-MONAI / research-contributions
  Implementations of recent research prototypes/demonstrations using MONAI.
  ☆1,129Updated 2 months ago
• BMEII-AI / RadImageNet
  RadImageNet, a pre-trained convolutional neural networks trained solely from medical imaging to be used as the basis of transfer learning…
  ☆401Updated last year
• jocpae / clDice
  ☆238Updated last year
• lescientifik / open_brats2020
  Top 10 brats 2020 Solution
  ☆172Updated 4 years ago