JackKuo666 / LLM-BioDataExtractorLinks
This is the pipeline of our new article "Enzyme Co-Scientist: Harnessing Large Language Models for Enzyme Kinetic Data Extraction from Literature'
☆13Updated 3 months ago
Alternatives and similar repositories for LLM-BioDataExtractor
Users that are interested in LLM-BioDataExtractor are comparing it to the libraries listed below
Sorting:
- Generative method to design novel proteins using a diffusion model☆43Updated 2 years ago
- ☆34Updated last year
- Python package to atom map, correct and suggest enzymatic reactions☆40Updated last year
- ☆43Updated last year
- A LLM agent framework for drug discovery☆17Updated last month
- ☆20Updated 4 years ago
- [Briefings in Bioinformatics] A Survey of Generative AI for de novo Drug Design☆89Updated 9 months ago
- Scalable Protein Language Model Finetuning with Distributed Learning and Advanced Training Techniques such as LoRA.☆27Updated last year
- ☆38Updated 2 months ago
- AlphaDrug: Protein Target Specific De Novo Molecular Generation☆40Updated 2 years ago
- RXN for biochemical reactions☆69Updated 2 years ago
- RNA, mRNA, DNA, Peptide, Protein, Antibody and Complex | Folding☆33Updated last month
- SELFormer: Molecular Representation Learning via SELFIES Language Models☆96Updated 8 months ago
- Biosynthesis Navigator for Natural Products☆50Updated 3 years ago
- PocketDTA☆30Updated 10 months ago
- A unified framework for predicting drug-target interactions, binding affinities and activation/inhibition mechanisms.☆46Updated last month
- ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…☆62Updated 6 months ago
- NodeCoder is a general framework based on graph convolutional neural network for protein function prediction.☆33Updated last year
- A Biological Foundation Model Bridging the Gap between Molecular Sequences Through Central Dogma☆27Updated 5 months ago
- A comprehensive repository dedicated to the collection and exploration of studies utilizing Large Language Models for molecular design, p…☆42Updated 2 years ago
- Machine learning models for antibody sequences in PyTorch☆41Updated 4 years ago
- A Multi-modal System for Automated Mining of Protein-Ligand Bioactivity Data from Literature☆54Updated last month
- Contrastive learning harmonizing protein language models and natural language models☆33Updated last year
- The first large protein language model trained follows structure instructions.☆84Updated 3 months ago
- ☆66Updated 10 months ago
- Official implementation of DrugGEN: Target Specific De Novo Design of Drug Candidate Molecules with Graph Transformer-based Generative Ad…☆69Updated 5 months ago
- ☆21Updated 3 months ago
- Multi-target de novo molecular generator conditioned on AlphaFold's latent protein embeddings.☆66Updated 5 months ago
- ☆27Updated 9 months ago
- HELM-GPT: de novo macrocyclic peptide design using generative pre-trained transformer☆26Updated last year