nipreps / fmriprep-rodents
fMRIPrep for Rodents
☆12Updated last year
Related projects: ⓘ
- ☆12Updated 2 months ago
- Open-source eddy-current and head-motion correction for dMRI.☆13Updated 2 weeks ago
- Template repo for bootstrapping and maintaining SOPs (Standard operation procedures)☆8Updated last year
- Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes☆31Updated 2 months ago
- NiiStat is a set of Matlab scripts for analyzing neuroimaging data from clinical populations☆30Updated 4 years ago
- fMRIPrep-Infants - A robust, transparent workflow tailored for neonate and infant MRI☆20Updated this week
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆58Updated 2 months ago
- Lightweight Python package to process MP2RAGE and ME-MP2RAGE-data☆19Updated 5 months ago
- niimath - a clone of fslmaths. Try the live demo:☆53Updated last week
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆64Updated 9 months ago
- fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/e…☆35Updated 2 weeks ago
- MP2RAGE Scripts - T1 map correction & Background noise removal☆49Updated last year
- nii_preprocess adapted for LARC and ABC studies at UofSC☆20Updated 2 years ago
- A Python implementation of 'dual-coding'☆39Updated 4 months ago
- A Rat fMRI multi-center study☆31Updated 2 years ago
- Small Animal Magnetic Resonance Imaging via Python.☆43Updated 6 months ago
- MOVED TO https://github.com/nipreps/dmriprep☆17Updated last year
- Processing tools for high-resolution neuroimaging☆63Updated 2 weeks ago
- This does everything that I need. Layering, smoothing-within layers, layer-connectivity, RF-coil,combination, 2D-dridding of layers and c…☆17Updated 3 weeks ago
- BIDS App for Hippunfold (automated hippocampal unfolding and subfield segmentation)☆46Updated last month
- Support for CMRR multi-band pulse sequences☆57Updated 8 months ago
- QSMxT is an end-to-end software toolbox for Quantitative Susceptibility Mapping.☆38Updated last week
- Non-linear warps between common rhesus macaque brain templates☆24Updated last year
- Gradient Unwarping in Python☆30Updated 2 months ago
- Stand alone fMRI software suite for layer-fMRI analyses.☆85Updated 3 months ago
- rapidtide - a suite of programs for doing time lag correlation analysis on fMRI data☆75Updated this week
- a standalone fork of nipy/nibabel#656☆28Updated this week
- ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…☆44Updated this week
- Tract based spatial statistics using ANTs and FSL☆11Updated last month
- BrkRaw: A comprehensive tool to access raw Bruker Biospin MRI data☆42Updated 2 months ago