GeneDx / phenopyLinks
Phenotype comparison tools using semantic similarity.
☆64Updated last year
Alternatives and similar repositories for phenopy
Users that are interested in phenopy are comparing it to the libraries listed below
Sorting:
- Python library for extracting HPO encoded phenotypes from text☆29Updated last year
- phenotype-based prioritization of candidate genes for human diseases☆65Updated 2 years ago
- ☆17Updated 2 years ago
- A phenotype-based tool for variant prioritization in WES and WGS data☆38Updated 2 years ago
- A combined deep learning tool for automated recognition of human phenotype ontology☆24Updated 2 years ago
- A framework for keeping biomedical text mining result up-to-date☆42Updated 4 years ago
- Phenotype driven gene prioritization for HPO☆45Updated 3 years ago
- Repo for downloading and storing OMIM data☆19Updated 8 years ago
- NGS course☆33Updated 8 years ago
- Generic human DNA variant annotation pipeline☆58Updated last year
- Analysis pipelines for genomic sequencing data☆68Updated last week
- LIkelihood Ratio Interpretation of Clinical AbnormaLities☆29Updated last month
- Framework for integrated analysis and plotting of ChIP/RIP/RNA/*-seq data☆87Updated 4 years ago
- ☆32Updated 4 months ago
- ☆23Updated 4 years ago
- Linking GWAS studies to genes through cis-regulatory datasets☆39Updated 2 years ago
- A pipeline that takes clinical notes from EHRs and generate phenotype terms, then generate ranked gene list☆37Updated last year
- simple comparison of snakemake, nextflow and cromwell/wdl☆49Updated 4 years ago
- An open-source and scalable solution to NGS analysis powered by the NIH's Biowulf cluster.☆4Updated last year
- A Strategy for Building and Using a Human Reference Pangenome☆70Updated 5 years ago
- MHC class II binding prediction☆14Updated 2 years ago
- ☆21Updated 2 months ago
- Website to analyze conflicting assertions in ClinVar☆18Updated last year
- Associations of genomic features, drugs and diseases☆48Updated 2 years ago
- An Open Platform for Harmonisation & Analysis of Sequencing & Phenotype Data☆33Updated 2 years ago
- Clinical interpretation of somatic mutations in cancer☆45Updated 3 months ago
- Simple and efficient access to genomic data for deep learning models.☆43Updated 5 years ago
- Universal RObust Peak Annotator☆16Updated last year
- Deep Feature Interaction Maps (DFIM)☆53Updated 6 years ago
- pathoscore evaluates variant pathogenicity tools and scores.☆21Updated 3 years ago