DavidTingley / RnR_methods
methods for detecting/quantifying reactivation and replay in neural data
☆12Updated 3 years ago
Alternatives and similar repositories for RnR_methods:
Users that are interested in RnR_methods are comparing it to the libraries listed below
- ☆13Updated 5 years ago
- Zenith of Event-based Time-locked Anomalies☆13Updated last year
- Python code implementing the ZETA-test☆26Updated last month
- Code for Krause and Drugowitsch (2022). "A large majority of awake hippocampal sharp-wave ripples feature spatial trajectories with momen…☆13Updated 2 years ago
- pynapple collaborative data analysis (high level python scripts)☆37Updated last year
- Functions to assess quality of spike sorting results☆32Updated last year
- Tutorial☆10Updated 4 years ago
- Match suite2p ROIs between imaging sessions☆25Updated 6 years ago
- WIP: Python port of Kilosort2☆50Updated last year
- ☆17Updated 11 months ago
- Utilities for managing Neuropixel datasets and Kilosort results☆46Updated last year
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆58Updated last week
- MClust is a Matlab-based spike sorting toolbox for the separation of putative cells from multi-site neurophysiological recordings. It is…☆17Updated 2 years ago
- pyqt5 dependent applications for IBL sessions☆26Updated 3 weeks ago
- A course given at the 2017 Canadian Neuroscience meeting, Neural Signal Analysis Satellite.☆14Updated 6 years ago
- Example analyses making extensive use of nelpy.☆10Updated 6 years ago
- Plugins for Phy2☆15Updated 3 months ago
- CNN-ripple is a 1D convolutional neural network (CNN) operating over high-density LFP recordings to detect hippocampal SWR both offline a…☆16Updated 2 years ago
- Code for Functional Mixed Models for Fiber Photometry☆11Updated last month
- MountainLab is data processing, sharing and visualization software for scientists. It is built around MountainSort, spike sorting softwar…☆44Updated 6 years ago
- A open toolbox of several machine learning approaches for sharp-wave ripple detection☆28Updated 9 months ago
- Code implements the LN model used to describe spike trains of MEC neurons based on the animal's position, head direction, speed, and thet…☆23Updated 2 years ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆59Updated 2 months ago
- MATLAB toolbox for spike-train community detection☆15Updated last year
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆73Updated 2 weeks ago
- Neuroelectrophysiology object model and data analysis in Python.☆51Updated last month
- Tools for identifying sharp wave ripple events using LFPs☆36Updated 6 months ago
- Archived code for reading data saved by the Open Ephys GUI☆61Updated 2 years ago
- Web app for viewing results of ephys spike sorting☆25Updated last month
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆46Updated 5 years ago