mackelab / poisson-gpfaLinks
Gaussian process factor analysis with Poisson observations
☆18Updated 3 years ago
Alternatives and similar repositories for poisson-gpfa
Users that are interested in poisson-gpfa are comparing it to the libraries listed below
Sorting:
- CorBinian: A toolbox for modelling and simulating high-dimensional binary and count-data with correlations☆19Updated 4 years ago
- Gaussian Process Factor Analysis☆30Updated 10 years ago
- Dimensionality reduction of spikes trains☆49Updated 3 years ago
- Matlab interface for Latent Factor Analysis via Dynamical Systems (LFADS)☆50Updated 3 years ago
- This code package is for the Tensor-Maximum-Entropy (TME) method. This method generates random surrogate data that preserves a specified …☆18Updated 7 years ago
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆47Updated 5 years ago
- Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).☆71Updated 5 years ago
- State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data☆49Updated 11 months ago
- Fitting and simulation of Poisson generalized linear model for single and multi-neuron spike trains (Pillow et al 2008).☆43Updated 6 years ago
- Revealing neural correlates of behavior without behavioral measurements☆15Updated 5 years ago
- Neyman-Scott point process model to identify sequential firing patterns in high-dimensional spike trains☆67Updated 2 years ago
- Recordings of 10k neurons during spontaneous behaviors☆52Updated last year
- Train excitatory-inhibitory recurrent neural networks for cognitive tasks.☆50Updated 9 years ago
- An algorithm for unsupervised discovery of sequential structure☆166Updated last year
- This repository contains code for (1) generating example neural responses from an Izhikevich model, and (2) fitting a GLM to neural respo…☆12Updated 2 years ago
- Tools for spike data analysis and visualization☆108Updated 2 years ago
- Pytorch implementation of LocaNMF☆36Updated 5 years ago
- A very simple and barebones tensor decomposition library for CP decomposition a.k.a. PARAFAC a.k.a. TCA☆36Updated last year
- IBL core shared libraries☆63Updated this week
- Recurrent Switching Linear Dynamical Systems☆111Updated 2 years ago
- An implementation of demixed Principal Component Analysis (a supervised linear dimensionality reduction technique)☆303Updated 3 years ago
- non-parametric inference for convolutional filters in poisson glms☆13Updated 3 years ago
- Supplementary code for the paper "Linking connectivity, dynamics and computations in low-rank recurrent neural networks" by F. Mastrogius…☆35Updated 7 years ago
- ☆57Updated 2 years ago
- Matlab codepack for performing dimensionality reduction on neural data using TD-GPFA or GPFA.☆20Updated 8 years ago
- ☆27Updated 3 weeks ago
- YASS: Yet Another Spike Sorter☆70Updated 2 years ago
- Calculate phase-amplitude coupling in Python (and Matlab).☆25Updated 7 years ago
- jPCA for Neural Data Analysis in Python☆50Updated 2 years ago
- Simple tutorial on Gaussian and Poisson GLMs for single and multi-neuron spike train data☆94Updated 3 years ago