DNA-and-Natural-Algorithms-Group / multistrandLinks
Multistrand nucleic acid kinetic simulator
☆20Updated 2 months ago
Alternatives and similar repositories for multistrand
Users that are interested in multistrand are comparing it to the libraries listed below
Sorting:
- Code used in the manuscript for De Novo Design of Bioactive Protein Switches☆16Updated 6 years ago
- Consolidated repository to perform RLXF☆36Updated last week
- ☆26Updated last month
- Source code and examples for AlphaFold Unmasked☆76Updated 2 months ago
- Fast and accurate protein structure prediction☆57Updated last year
- pdbx is a parser module in python for structures of the protein data bank in the mmcif format☆30Updated last year
- Autoregressive networks for protein☆38Updated 11 months ago
- ☆18Updated 8 years ago
- lib310 python package☆23Updated 2 years ago
- Template-based protein design with Raygun☆76Updated last week
- Structural Bioinformatics is awesome. Throw your textbook in the garbage, light the garbage can on fire, and blend the ashes into your co…☆75Updated 2 years ago
- Pseudo Likelihood Maximization for protein in Julia☆51Updated 8 months ago
- Benchmarking common tasks on proteins in various languages and packages☆42Updated 5 years ago
- Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."☆71Updated last year
- awesome tools for RNA☆17Updated 3 years ago
- The Integrative Modeling Platform☆81Updated this week
- Computes a molecular graph for protein structures.☆58Updated last week
- The software system of improving AlphaFold2- and AlphaFold-Multimer-based protein tertiary & quaternary structure prediction. It was deve…☆33Updated 2 years ago
- ☆26Updated 2 years ago
- An introductory workshop to protein language models☆17Updated 3 years ago
- pyFoldX: python bindings for FoldX.☆53Updated 4 years ago
- Protein Sequence Design with Deep Learning and Tooling like Monte Carlo Sampling and Analysis☆63Updated 2 months ago
- A Python package to manage protein design workflows on computing clusters and local machines. Documentation can be found here: https://pr…☆34Updated this week
- ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…☆66Updated 4 months ago
- To analyze fluctuations in DNA or RNA structures in molecular dynamics trajectories.☆27Updated 9 months ago
- Variational autoencoder for protein sequences - add metal binding sites and generate sequences for novel topologies☆94Updated 2 years ago
- Peptide optimization with Machine Learning☆78Updated 3 years ago
- ☆20Updated 4 years ago
- A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.☆41Updated 2 years ago
- Fast protein structure searching or your money back☆118Updated last week