Crop-Phenomics-Group / SeedGermLinks
SeedGerm: automated seed phenotyping
☆18Updated 4 years ago
Alternatives and similar repositories for SeedGerm
Users that are interested in SeedGerm are comparing it to the libraries listed below
Sorting:
- A deeplearning driving bioinformatic toolkit.☆23Updated 5 months ago
- Repository for code used for publications☆29Updated 2 months ago
- A repo for scripts and associated files for the Botany 2020 Virtual Nonmodel Genomics Workshop☆15Updated 5 years ago
- ☆36Updated 3 years ago
- ☆26Updated 5 years ago
- ☆43Updated 3 years ago
- ☆17Updated last year
- GWAS software that can handle autopolyploids☆31Updated 2 months ago
- repository for code used in analysis of open wild wheat consortium☆18Updated 4 years ago
- Data and scripts used in the oneKP capstone analyses☆13Updated 3 years ago
- scripts for the project of seven thaliana genomes assembly☆42Updated 4 years ago
- BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions☆39Updated 9 months ago
- ☆18Updated 4 years ago
- Build haplotye and generate figures☆19Updated 2 months ago
- Codes for the lettuce resequencing project in 2020☆31Updated 4 years ago
- A haplotype analysis toolkit for natural variation study.☆31Updated 2 years ago
- This is the script used for analysis the population data of alfalfa☆11Updated last year
- Reliable Association INference By Optimizing Weights with R (R package for SNP-set GWAS and multi-kernel mixed model)☆24Updated 3 months ago
- Scripts to convert between file formats for various analyses☆16Updated 8 months ago
- R-package: Calculation of haplotype blocks and libraries☆35Updated 5 months ago
- Automated de novo assembly of whole chloroplast genomes.☆47Updated last year
- ☆12Updated 4 years ago
- R package for binmap☆12Updated 2 years ago
- A pipeline that accepts a VCF file to run through Admixture☆63Updated last year
- Source code from Zhang et al., (2014) Genomic data of avian phylogenomics project. GigaScience 3:26☆35Updated 2 years ago
- Best practices and workflow for genome annotation☆79Updated 8 months ago
- scripts used to download and analyze insect assemblies from GenBank☆15Updated 4 years ago
- RAiSD: software to detect positive selection based on multiple signatures of a selective sweep and SNP vectors☆36Updated 2 years ago
- These are scripts that I use frequently in genome annotation projects. Some of them have evolved awkwardly so the code is difficult to fo…☆16Updated 8 years ago
- ☆31Updated last week