materials for the RNA-Seq workshop on Trinity and Tuxedo, covering de novo and genome-guided transcript assembly and downstream analysis.
☆21Oct 18, 2016Updated 10 years ago
Alternatives and similar repositories for RNASeq_Trinity_Tuxedo_Workshop
Users that are interested in RNASeq_Trinity_Tuxedo_Workshop are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆29Apr 6, 2022Updated 4 years ago
- Practice your pandas skills!☆27Jun 26, 2022Updated 4 years ago
- Jupyter notebook and datasets from the pandas Q&A video series☆24May 16, 2022Updated 4 years ago
- 3-days Workshop on Data Science with Python in Agriculture☆19Oct 28, 2022Updated 4 years ago
- ☆18Feb 26, 2023Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A 4-months long course on Codanics☆68Dec 27, 2022Updated 3 years ago
- This repository is about an application to make a world cloud from any kind of document/s.☆25Sep 6, 2023Updated 3 years ago
- ☆18Feb 16, 2024Updated 2 years ago
- This repository is about an application to make a word cloud from any kind of document/s.☆10Feb 25, 2024Updated 2 years ago
- ☆245Jan 7, 2026Updated 10 months ago
- The NFDI4Microbiota Knowledge Base, for visualizing dev branch: https://kb-dev.nfdi4microbiota.de☆28Oct 16, 2026Updated 3 weeks ago
- This is a profile repository.☆44Feb 20, 2024Updated 2 years ago
- ☆17May 19, 2022Updated 4 years ago
- hybrid assembly and differential binning workflow for metagenomics, transcriptomics and pathway analysis☆71Feb 9, 2025Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- collection of random scripts for processing genome related files. the shell scripts are specific to my environment and may not work else…☆10Jul 19, 2018Updated 8 years ago
- Pipeline for processing and analyzing CiFi data☆13Sep 24, 2026Updated last month
- PAQman is a tool for a reference-free and comprehensive evaluation of genome assemblies☆10Sep 5, 2026Updated 2 months ago
- Fungal genome assembly and annotation from Illumina short reads, ONT or PacBio HiFi long reads, a hybrid of short and long reads, or an e…☆15Updated this week
- Listing of GPU based bioinformatics software & sites & publications☆12Jan 16, 2022Updated 4 years ago
- ☆157Jul 24, 2026Updated 3 months ago
- This repository is a cloud storage of my new research ideas and interests in Bioinformatics and Computational Biology. Github is a good w…☆17May 30, 2017Updated 9 years ago
- A comparative genome scaffolding tool☆16Oct 6, 2018Updated 8 years ago
- Fungal Validation and Identification Pipeline☆16Oct 1, 2026Updated last month
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- EMBO Practical Pangenomics Course 2026☆17Jun 22, 2026Updated 4 months ago
- Toolbox for comparative genomics of MAGs☆93Oct 22, 2026Updated 2 weeks ago
- Genome Assembly 102☆19Apr 23, 2025Updated last year
- Mostly useful scripts and files for processing MiSeq amplicon data☆20Jul 1, 2016Updated 10 years ago
- programs and scripts, mainly python, for analyses related to nucleic or protein sequences☆24Oct 27, 2026Updated last week
- ☆18Jun 30, 2023Updated 3 years ago
- Code related to scRNA analysis using the scAmpi workflow☆26Jun 24, 2026Updated 4 months ago
- Effector prediction pipeline based on protein properties.☆17Jul 18, 2025Updated last year
- Gene Ontology subgraph visualizations☆19Jan 6, 2026Updated 10 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Pangenome analysis of eukaryotes.☆21Sep 21, 2020Updated 6 years ago
- Demo of a new awesome decision tree viz library☆19Mar 19, 2021Updated 5 years ago
- Support scripts for the visualisation of pangenome analyses in Graphia☆22Oct 7, 2024Updated 2 years ago
- Utilities written for bioinformatics☆17Sep 27, 2022Updated 4 years ago
- Identifies duplicate reads. This tool locates and tags duplicate reads in a coordinate ordered SAM or BAM file.☆31Jan 21, 2026Updated 9 months ago
- Synteny Mapping and Analysis Program☆30Oct 28, 2026Updated last week
- Nano Banana Studio: AI-Powered Marketing Asset Creator with Real-Time Brand Enhancement☆40Sep 10, 2025Updated last year