FangpingWan / NeoDTILinks
NeoDTI: Neural integration of neighbor information from a heterogeneous network for discovering new drug-target interactions
☆77Updated 4 years ago
Alternatives and similar repositories for NeoDTI
Users that are interested in NeoDTI are comparing it to the libraries listed below
Sorting:
- This is the repository containing the source code for my Master's thesis research, about predicting drug-target interaction using deep le…☆43Updated 6 years ago
- Algorithms for prediction of drug-target interactions via computational (chemogenomic) methods☆47Updated 6 years ago
- Protein Interface Prediction using Graph Convolutional Networks☆93Updated 5 years ago
- Realizing DTINet with python☆27Updated 7 years ago
- Deep learning-based drug-target interaction prediction / Deep belief net (DBN) based on Theano☆49Updated 6 years ago
- An end-to-end heterogeneous graph representation learning-based framework for drug-target interaction prediction☆30Updated 3 years ago
- A Network Integration Approach for Drug-Target Interaction Prediction☆183Updated 2 years ago
- Deep Generative Models for Drug Combination (Graph Set) Generation given Hierarchical Disease Network Embedding☆30Updated 2 years ago
- This is a code for compound-protein interaction (CPI) prediction based on a graph neural network (GNN) for compounds and a convolutional …☆165Updated 4 years ago
- ☆14Updated 5 years ago
- a novel DTA predition method using graph neural network☆74Updated 2 years ago
- SkipGNN: Predicting Molecular Interactions with Skip-Graph Networks (Scientific Reports)☆64Updated 5 years ago
- ☆25Updated 3 years ago
- This repository provides an implementation of the DTiGEMSplus tool, a network-based method for computational Drug-Target Interaction pred…☆27Updated 4 years ago
- ☆34Updated 4 years ago
- DeepConv-DTI: Prediction of drug-target interactions via deep learning with convolution on protein sequences☆78Updated 3 years ago
- Three-Dimensionally Embedded Graph Convolutional Network (3DGCN) for Molecule Interpretation☆54Updated 6 years ago
- PyTorch implementation of "TGSA: Protein-Protein Association-Based Twin Graph Neural Networks for Drug Response Prediction with Similarit…☆24Updated 3 years ago
- ☆55Updated last year
- CASTER: Predicting Drug Interactions with Chemical Substructure Representation (AAAI 2020)☆25Updated 4 years ago
- Implementation for the paper MoCL: Contrastive Learning on Molecular Graph with multi-level Domain Knowledge☆41Updated 2 years ago
- HyperAttentionDTI: improving drug–protein interaction prediction by sequence-based deep learning with attention mechanism. This repositor…☆44Updated 4 years ago
- ☆17Updated 4 years ago
- ProteinGCN: Protein model quality assessment using Graph Convolutional Networks☆119Updated last year
- Codes and models for the paper "Learning Unknown from Correlations: Graph Neural Network for Inter-novel-protein Interaction Prediction".☆82Updated 3 years ago
- MONN: a Multi-Objective Neural Network for Predicting Pairwise Non-Covalent Interactions and Binding Affinities between Compounds and Pro…☆104Updated 5 years ago
- Predicting drug-target interaction using multi-label learning with community detection method (DTI-MLCD)☆13Updated 5 years ago
- ☆78Updated last year
- ☆47Updated last year
- Protein-compound affinity prediction through unified RNN-CNN☆149Updated last year