vedranaa / local-thickness
Fast local thickness in 3D and 2D
☆13Updated last year
Alternatives and similar repositories for local-thickness
Users that are interested in local-thickness are comparing it to the libraries listed below
Sorting:
- Process and analyze surfaces using vedo in napari.☆24Updated last year
- ☆20Updated last year
- ☆10Updated last year
- Pipeline for putting surface meshes into correspondence☆26Updated 2 years ago
- ☆22Updated last year
- An ImageJ script to align and stitch three-dimensional tiles and quickly explore terabyte-sized microscopy datasets☆13Updated 3 years ago
- Interacting Active Surfaces☆9Updated 2 years ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆26Updated last week
- Python module for registering and fusing multi-view microscopy data☆23Updated 2 months ago
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆29Updated last week
- Segment images by pixel classification based on pre-trained convolutional layer feature extraction☆32Updated last month
- LSTree is a digital organoid and lineage tree extraction workflow for light sheet movies.☆18Updated last year
- GPU-accelerated image processing in Matlab using CLIJ☆9Updated 3 years ago
- A python package for fitting splines.☆20Updated last month
- A napari plugin for itk-elastix☆38Updated 11 months ago
- Intensify3D is an image normalization tool for large scale fluorescent imaging. It corrects heterogeneities in the signal (defined by the…☆19Updated 4 years ago
- This contribution provides an interface in MATLAB to read and write Zarr files. Zarr is a file format for scientific data (like HDF5 and …☆13Updated this week
- Multiple particle tracking in dense 3D particle fields complemented with dynamic regions of interest and trackability inferences for the …☆27Updated last week
- A napari plugin for making animations☆84Updated 8 months ago
- napari plugin for trackastra☆13Updated 6 months ago
- ☆11Updated last month
- dask empowered fast4dreg☆11Updated 5 months ago
- Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data☆25Updated 4 years ago
- Fast Iterative Digital Volume Correlation Algorithm☆34Updated 2 years ago
- Utils and convenience functions for large-scale bio-image analysis.☆54Updated this week
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Updated last week
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆20Updated 5 months ago
- Multilabel and Grey 3D morphological image processing functions. Dilate, Erode, Opening, Closing, Hole Filling.☆15Updated 3 weeks ago
- Quanfima (Quantitative Analysis of Fibrous Materials)☆29Updated last year
- Reduce the size of existing CZI-documents by converting them to zstd-compressed CZI documents☆22Updated last month