vadori / cytoarkLinks
Processing of histological data for cytoarchitecture analyses.
☆18Updated 11 months ago
Alternatives and similar repositories for cytoark
Users that are interested in cytoark are comparing it to the libraries listed below
Sorting:
- DAS-MIL: Distilling Across Scales for MILClassification of Histological WSIs☆64Updated last year
- Feather - Lightweight supervised slide foundation models (ICML 2025)☆130Updated 3 weeks ago
- Cell Graph Transformer for Nuclei Classification, AAAI 2024☆27Updated last year
- Amgad M, Salgado R, Cooper LA. A panoptic segmentation approach for tumor-infiltrating lymphocyte assessment: development of the MuTILs m…☆27Updated 5 months ago
- Standardized benchmark for computational pathology foundation models.☆125Updated 2 months ago
- Morphological Prototyping for Unsupervised Slide Representation Learning in Computational Pathology - CVPR 2024☆147Updated 11 months ago
- A transformer-based weakly supervised computational pathology method for clinical-grade diagnosis and molecular state revelation of gliom…☆38Updated last year
- Gpu accelerated vahadane stain normalization for Digital Pathology workflows.☆25Updated last year
- ☆56Updated 9 months ago
- This repo provides the pipeline of processing TCGA whole-slide images for downstream pathology analysis.☆87Updated 10 months ago
- ☆36Updated 3 weeks ago
- A generative toolkit to translate H&E images to multiplexed IHC☆60Updated last year
- Analysis of 3D pathology samples using weakly supervised AI - Cell☆113Updated last year
- ☆71Updated 4 years ago
- ☆28Updated last year
- AdvMIL: Adversarial Multiple Instance Learning for the Survival Analysis on Whole-Slide Images (Medical Image Analysis 2024)☆39Updated 2 years ago
- PathDino - Rotation-Agnostic Image Representation Learning for Digital Pathology (CVPR 2024)☆31Updated last year
- Multimodal prototyping for cancer survival prediction - ICML 2024☆113Updated 11 months ago
- Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021☆160Updated last year
- ZoomMIL is a multiple instance learning (MIL) method that learns to perform multi-level zooming for efficient Whole-Slide Image (WSI) cla…☆68Updated 3 years ago
- Implementation of LA_MIL, Local Attention Graph-based Transformer for WSIs, PyTorch☆24Updated 2 years ago
- NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation☆55Updated 3 years ago
- Histomic Prognostic Signature (HiPS): A population-level computational histologic signature for invasive breast cancer prognosis☆32Updated last year
- [MICCAI 2023 Oral] The official code of "Pathology-and-genomics Multimodal Transformer for Survival Outcome Prediction" (top 9%)☆107Updated last month
- SI-MIL☆35Updated last year
- Modeling Dense Multimodal Interactions Between Biological Pathways and Histology for Survival Prediction - CVPR 2024☆160Updated last year
- MADELEINE: multi-stain slide representation learning (ECCV'24)☆65Updated 11 months ago
- ☆57Updated 2 years ago
- Awesome List of Digital and Computational Pathology Resources☆103Updated last year
- [CVPR'23] Histopathology Whole Slide Image Analysis with Heterogeneous Graph Representation Learning☆94Updated 2 years ago