vadori / cytoarkLinks
Processing of histological data for cytoarchitecture analyses.
☆19Updated 9 months ago
Alternatives and similar repositories for cytoark
Users that are interested in cytoark are comparing it to the libraries listed below
Sorting:
- DAS-MIL: Distilling Across Scales for MILClassification of Histological WSIs☆62Updated 11 months ago
- ☆54Updated 7 months ago
- Feather - Lightweight supervised slide foundation models (ICML 2025)☆110Updated 3 months ago
- Cell Graph Transformer for Nuclei Classification, AAAI 2024☆25Updated last year
- [MICCAI 2023 Oral] The official code of "Pathology-and-genomics Multimodal Transformer for Survival Outcome Prediction" (top 9%)☆99Updated 8 months ago
- ☆71Updated 4 years ago
- NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation☆55Updated 3 years ago
- This repo provides the pipeline of processing TCGA whole-slide images for downstream pathology analysis.☆81Updated 8 months ago
- Python library for processing whole slide images (WSIs) in sdpc format☆61Updated 9 months ago
- MADELEINE: multi-stain slide representation learning (ECCV'24)☆63Updated 9 months ago
- CVPR 2023 Highlight☆93Updated last year
- AdvMIL: Adversarial Multiple Instance Learning for the Survival Analysis on Whole-Slide Images (Medical Image Analysis 2024)☆40Updated 2 years ago
- ☆37Updated 2 years ago
- [CVPR'23] Histopathology Whole Slide Image Analysis with Heterogeneous Graph Representation Learning☆93Updated 2 years ago
- The official implementation of GPFM☆100Updated 2 months ago
- Standardized benchmark for computational pathology foundation models.☆114Updated last week
- Pseudo-Bag Mixup Augmentation for Multiple Instance Learning-Based Whole Slide Image Classification (IEEE TMI 2024)☆66Updated 8 months ago
- ☆68Updated 3 years ago
- Modeling Dense Multimodal Interactions Between Biological Pathways and Histology for Survival Prediction - CVPR 2024☆154Updated last year
- Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021☆157Updated last year
- ☆27Updated 9 months ago
- SI-MIL☆31Updated 10 months ago
- This package provides tools for training supervised machine learning models for computational pathology tasks using tile-level embeddings…☆42Updated 6 months ago
- ☆57Updated 3 years ago
- Morphological Prototyping for Unsupervised Slide Representation Learning in Computational Pathology - CVPR 2024☆143Updated 8 months ago
- This is the official repository for our CVPR 2023 paper 'Task-Specific Fine-Tuning via Variational Information Bottleneck for Weakly-Supe…☆87Updated last year
- Implementation of LA_MIL, Local Attention Graph-based Transformer for WSIs, PyTorch☆24Updated 2 years ago
- Attention-Challenging Multiple Instance Learning for Whole Slide Image Classification (ECCV2024)☆119Updated 6 months ago
- MuRCL: Multi-instance Reinforcement Contrastive Learning for Whole Slide Image Classification☆27Updated 3 years ago
- ☆66Updated last year