yasohasakii / WSI-SDK
Toolkit for WSI preprocess, such as resample & zoom, mask, roi selection ect.
☆23Updated 5 years ago
Alternatives and similar repositories for WSI-SDK
Users that are interested in WSI-SDK are comparing it to the libraries listed below
Sorting:
- ☆51Updated last month
- Re-stained whole slide image alignment☆33Updated last year
- ☆35Updated 2 years ago
- Repository for "Gigapixel Whole-Slide Images Classification using Locally Supervised Learning" (MICCAI 2022)☆28Updated 2 years ago
- Simple library for preprocessing histopathological whole-slide images (WSI) into tiles (a.k.a. patches) towards deep learning☆53Updated last year
- [ESWA 2023] Implementation of DSCA: A Dual-stream Network with Cross-attention on Whole-Slide Image Pyramids for Cancer Prognosis☆21Updated last year
- ☆26Updated 2 years ago
- Deep learning enabled assessment of cardiac allograft rejection from endomyocardial biopsies- Nature Medicine☆31Updated 3 years ago
- ☆55Updated 3 years ago
- ☆59Updated 7 months ago
- Implementation of LA_MIL, Local Attention Graph-based Transformer for WSIs, PyTorch☆25Updated last year
- Histomic Prognostic Signature (HiPS): A population-level computational histologic signature for invasive breast cancer prognosis☆28Updated last year
- SEGmentation using Graphs with Inexact aNd Incomplete labels☆23Updated 3 years ago
- A simple tool used for normalize whole slide images, support macenko, reinhard, vahadane (GPU accelerate)☆21Updated last week
- Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021☆148Updated last year
- H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.☆54Updated last year
- GPU-accelerated stain normalization command line tool☆20Updated last year
- NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation☆54Updated 3 years ago
- CoNIC Challenge☆63Updated last year
- The source code of 'Diagnose Like A Pathologist: Weakly-Supervised Pathologist-Tree Network for Slide-Level Immunohistochemical Scoring' …☆25Updated 4 years ago
- this repo is for Grand Challenge WSSS4LUAD, detail information about the contest is on https://wsss4luad.grand-challenge.org/WSSS4LUAD/☆19Updated 3 years ago
- Code related to the PANDA challenge on artificial intelligence for Gleason grading☆18Updated 3 years ago
- End-to-end pipeline to go from raw H&E slides to normalised extracted features for training☆25Updated last year
- ☆38Updated 3 years ago
- ☆16Updated 11 months ago
- Amgad M, Salgado R, Cooper LA. A panoptic segmentation approach for tumor-infiltrating lymphocyte assessment: development of the MuTILs m…☆19Updated last week
- Whole Slide Image (WSI) Processing Library for Histopathological / Cytopathological Machine Learning Tasks☆24Updated last year
- Radiopathomics: a framework of fusing multi-scale images information to enrich description of tumor heterogeneity for LARC patients prior…☆20Updated 4 years ago
- Implementation of Cluster-to-Conquer: A Framework for End-to-End Multi-Instance Learning for Whole Slide Image Classification approach.☆61Updated 3 years ago
- Tools for whole slide image (WSI) processing. Especially for (pairwise) patch extraction, annotation parsing and data preparation for dee…☆52Updated 5 months ago