yasohasakii / WSI-SDKLinks
Toolkit for WSI preprocess, such as resample & zoom, mask, roi selection ect.
☆26Updated 6 years ago
Alternatives and similar repositories for WSI-SDK
Users that are interested in WSI-SDK are comparing it to the libraries listed below
Sorting:
- Predicting gastric cancer outcome from resected lymph node histopathology images using deep learning☆35Updated 4 years ago
- Python library for processing whole slide images (WSIs) in sdpc format☆58Updated 8 months ago
- Histomic Prognostic Signature (HiPS): A population-level computational histologic signature for invasive breast cancer prognosis☆32Updated last year
- Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021☆155Updated last year
- Code related to the PANDA challenge on artificial intelligence for Gleason grading☆18Updated 3 years ago
- Re-stained whole slide image alignment☆35Updated last year
- ☆36Updated 2 years ago
- ☆54Updated 5 months ago
- GPU-accelerated stain normalization command line tool☆22Updated last year
- Radiopathomics: a framework of fusing multi-scale images information to enrich description of tumor heterogeneity for LARC patients prior…☆22Updated 4 years ago
- NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation☆54Updated 3 years ago
- AdvMIL: Adversarial Multiple Instance Learning for the Survival Analysis on Whole-Slide Images (Medical Image Analysis 2024)☆38Updated last year
- ☆24Updated 3 years ago
- Whole Slide Image segmentation with weakly supervised multiple instance learning on TCGA | MICCAI2020 https://arxiv.org/abs/2004.05024☆140Updated 4 years ago
- Histopathology Image Analysis☆92Updated 2 years ago
- Exploring prognostic indicators in pathological images of hepatocellular carcinoma based on deep learning☆45Updated 4 years ago
- Amgad M, Salgado R, Cooper LA. A panoptic segmentation approach for tumor-infiltrating lymphocyte assessment: development of the MuTILs m…☆25Updated last month
- Tools for whole slide image (WSI) processing. Especially for (pairwise) patch extraction, annotation parsing and data preparation for dee…☆56Updated 10 months ago
- Deep learning enabled assessment of cardiac allograft rejection from endomyocardial biopsies- Nature Medicine☆34Updated 3 years ago
- CEll spatial Organization-based graph convolutional network☆26Updated last year
- Code from Foersch et al. (Under Construction / Development)☆37Updated 2 years ago
- ☆56Updated 3 years ago
- A simple tool used for normalize whole slide images, support macenko, reinhard, vahadane (GPU accelerate)☆28Updated 5 months ago
- Multimodal deep learning to predict distant recurrence-free probability from digitized H&E tumour slide and tumour stage.☆43Updated 9 months ago
- Simple library for preprocessing histopathological whole-slide images (WSI) into tiles (a.k.a. patches) towards deep learning☆55Updated 2 years ago
- End-to-end pipeline to go from raw H&E slides to normalised extracted features for training☆27Updated last year
- ☆20Updated last year
- ☆64Updated last year
- CoNIC Challenge☆69Updated last year
- Whole Slide Image (WSI) Processing Library for Histopathological / Cytopathological Machine Learning Tasks☆24Updated 2 years ago