Alternatives and similar repositories for workshop-hpc-python:

Users that are interested in workshop-hpc-python are comparing it to the libraries listed below

• uschpc / workshop-r-hpc
  Workshop materials for HPC with R
  ☆9Updated last year
• vsoch / forward
  Port Forwarding Utility
  ☆53Updated last year
• NIH-HPC / Singularity-Tutorial
  How to use Singularity!
  ☆67Updated 4 years ago
• AllenInstitute / MTG_celltypes
  Human cortical cell types
  ☆24Updated 5 years ago
• pachterlab / picasso
  Picasso: a methods for embedding points in 2D in a way that respects distances while fitting a user-specified shape.
  ☆70Updated 7 months ago
• bihealth / bih-cluster
  BIH Cluster Wiki
  ☆16Updated this week
• snakemake-workflows / snakemake-workflow-template
  A template for standard compliant snakemake-workflows
  ☆91Updated last year
• kaczmarj / apptainer-in-docker
  Apptainer in Docker!
  ☆45Updated 2 months ago
• CostaLab / CrossTalkeR
  R package to do the Ligand Receptor Analysis Visualization
  ☆41Updated this week
• quantixed / manuscript-templates
  LaTeX templates for manuscripts. bioRxiv preprint and journal submission templates. For use on Overleaf.
  ☆72Updated 8 months ago
• FridleyLab / spatialGE
  Methods for visualization and analysis of spatially-resolved gene expression
  ☆15Updated 3 months ago
• gitter-lab / ml4bio
  A graphical interface for sklearn classification to introduce machine learning to biologists
  ☆11Updated 2 years ago
• nih-cfde / training-and-engagement
  Materials for the Training and Engagement Website
  ☆25Updated last year
• ponnhide / pyCircos-examples
  Example notebooks of pyCircos
  ☆28Updated 2 years ago
• PawseySC / singularity-containers
  Webinars&Tutorial on Containers on HPC and Cloud with Singularity
  ☆27Updated 3 years ago
• jdblischak / smk-simple-slurm
  A simple Snakemake profile for Slurm without --cluster-config
  ☆150Updated 7 months ago
• MorrellLAB / DoesNaughtCompute
  Code and example datasets for Does[0]Compute
  ☆12Updated 3 years ago
• fastlmm / FaST-LMM
  Python version of Factored Spectrally Transformed Linear Mixed Models
  ☆49Updated 3 months ago
• Phillip-a-richmond / PrecisionHealthVirtualEnvironment
  This is a virtual environment which contains databases, software, workflows, and workshops for Precision Health Data Analysis.
  ☆22Updated last year
• CEGRcode / scriptmanager
  ☆14Updated 2 months ago
• LieberInstitute / VistoSeg
  Image processing pipeline for spatial projects
  ☆15Updated last year
• USCbiostats / slurmR
  slurmR: A Lightweight Wrapper for Slurm
  ☆59Updated 8 months ago
• cognoma / figshare
  A package for downloading and uploading figshare data
  ☆23Updated last year
• ycrc / ycrc.github.io
  documentation repo for the YCRC, see src branch for more info
  ☆40Updated this week
• jessica1338 / CSHMM-for-time-series-scRNA-Seq
  This is the code release for paper Continuous State HMMs for Modeling Time Series Single Cell RNA-Seq Data
  ☆22Updated 7 years ago
• jfnavarro / st_analysis
  A toolset for analysis and visualisation of Spatial Transcriptomics datasets.
  ☆18Updated 3 years ago
• Snakemake-Profiles / slurm
  Cookiecutter for snakemake slurm profile
  ☆129Updated 9 months ago
• troycomi / reportseff
  Tabular seff
  ☆77Updated last month
• carpentries-incubator / high-dimensional-stats-r
  High-dimensional statistics with R
  ☆11Updated last week
• AllenInstitute / scrattch.hicat
  Hierarchical, iterative clustering for analysis of transcriptomics data in R
  ☆109Updated 8 months ago