IcarPA-TBlab / BioGraphLinks
BioGraph: an online service and a graph DB for querying and analyzing bioinformatics resources
☆11Updated 7 years ago
Alternatives and similar repositories for BioGraph
Users that are interested in BioGraph are comparing it to the libraries listed below
Sorting:
- python client for reactome content, analysis, and human functional protein interactions (FI) services api calls.☆34Updated last year
- Python Client Package for WikiPathways☆22Updated last week
- StarGazer is a tool designed for rapidly assessing drug repositioning opportunities. It combines multi-source, multi-omics data with a no…☆35Updated 2 years ago
- a collection of colabs useful for molecular biology☆31Updated last year
- ☆32Updated 2 months ago
- Project code for BioHackathon Europe 2023.☆18Updated last year
- Methods for mapping genomic data onto 3D protein structure.☆28Updated 3 years ago
- The MPI Bioinformatics Toolkit☆69Updated 4 months ago
- ☆26Updated 2 years ago
- Metabolic In silico Network Expansion (MINE) Database Construction and DB Logic☆20Updated last year
- Predict the structure of immune receptor proteins☆56Updated last year
- Convert PDB residues to their Uniprot equivalents☆17Updated 5 years ago
- ☆26Updated 2 weeks ago
- 🌶️ An ecosystem in Python for working with the Biological Expression Language (BEL)☆137Updated last year
- 🎨 Python library to plot multi-part genetic constructs☆25Updated 8 months ago
- An RNA manipulation library.☆56Updated last year
- BRENDA parser in python☆22Updated 3 years ago
- A Python package for mapping sequence aligned data onto protein structures☆36Updated 4 years ago
- METIS: A versatile active learning workflow for optimization of genetic and metabolic networks☆30Updated 3 years ago
- Python code to color a PDB structure based on parameters from a multiple sequence alignment☆33Updated this week
- ☆16Updated 3 years ago
- A Python platform for Structural Bioinformatics☆58Updated 9 months ago
- A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.☆41Updated 2 years ago
- openASO is a project designed to identify regulatory regions of an RNA that can be targeted by antisense oligonucleotides.☆10Updated 4 years ago
- iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…☆32Updated 2 years ago
- awesome tools for RNA☆17Updated 3 years ago
- MOLeculAR structure annoTator☆33Updated last year
- Structural Bioinformatics is awesome. Throw your textbook in the garbage, light the garbage can on fire, and blend the ashes into your co…☆75Updated 2 years ago
- Pipeline for assessing the tractability of potential targets (starting from Gene IDs)☆29Updated 10 months ago
- CodonBert: a BERT-based architecture tailored for codon optimization using the cross-attention mechanism.☆42Updated last year