nicodjimenez / fit_neuronLinks
A neuroscience python package for the estimation and evaluation of neural models from patch clamp neural recordings, including a library of spike distance metrics..
☆18Updated 10 years ago
Alternatives and similar repositories for fit_neuron
Users that are interested in fit_neuron are comparing it to the libraries listed below
Sorting:
- Python tools for analysis of neurophysiology data☆37Updated last year
- a Python machine learning library for neurophysiology data☆36Updated 6 years ago
- Recordings of 10k neurons during spontaneous behaviors☆52Updated last year
- Fitting and simulation of Poisson generalized linear model for single and multi-neuron spike trains (Pillow et al 2008).☆40Updated 5 years ago
- YASS: Yet Another Spike Sorter☆67Updated 2 years ago
- Linear-Nonlinear-Poisson (LNP) model fitting via Maximally-Informative-Dimensions (MID) / maximum likelihood☆18Updated 7 years ago
- Tools for spike data analysis and visualization☆106Updated 2 years ago
- Functions to assess quality of spike sorting results☆34Updated last year
- Python implementation of spike distance metrics☆74Updated 10 months ago
- Multichannel time series lossless compression in pure Python based on NumPy and zlib☆40Updated 3 months ago
- Deconvolution of calcium imaging data☆96Updated 5 months ago
- Python code for estimation of linear-nonlinear model parameters☆22Updated 4 years ago
- Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).☆70Updated 5 years ago
- IBL core shared libraries☆63Updated this week
- Interpretable neural spike train models with fully-Bayesian inference algorithms☆47Updated 6 years ago
- Pytorch implementation of LFADS for demo at CAN workshop☆19Updated 5 years ago
- deep-retina is a project to build a convolutional neural network that can predict retinal ganglion cell responses to natural stimuli with…☆54Updated 2 years ago
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆46Updated 5 years ago
- Accompanying code for Aljadeff et al., 'Analysis of Neuronal Spike Trains, Deconstructed', Neuron (2016)☆10Updated 8 years ago
- Fast Exact Spike Inference Via L0 Optimization☆15Updated 5 years ago
- Pytorch implementation of LocaNMF☆36Updated 5 years ago
- NeuroTools is a collection of tools for representing and anlyzing neuroscientific data.☆32Updated 5 years ago
- Some python functions to supplement the NEURON python module☆29Updated 6 years ago
- Repository of standard .prb files for different manufacturers.☆9Updated 9 years ago
- Neuroelectrophysiology object model and data analysis in Python.☆50Updated 3 months ago
- A workshop for teaching python to neuroscientists with some previous programming experience.☆35Updated 9 years ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆116Updated 10 months ago
- Responses of 10,000 neurons to 2,800 natural images☆68Updated 5 years ago
- Fast and customizable of extracellular recordings on MEA☆43Updated 2 weeks ago
- A class for using ML algorithms for spike prediction☆60Updated 7 years ago