Toolkits for NCBI Pubmed
☆30Nov 22, 2024Updated last year
Alternatives and similar repositories for pypubmed
Users that are interested in pypubmed are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆11Jul 6, 2023Updated 3 years ago
- PDF Downloader with SCI-HUB☆54Jul 14, 2023Updated 3 years ago
- sci palettes for matplotlib/seaborn☆10Feb 14, 2022Updated 4 years ago
- Repository for the Broad Institute Proteogenomic Data Analysis Center (PGDAC) established by the NIH Clinical Proteomics Tumor Analysis C…☆39Oct 1, 2026Updated last week
- Python package for Customizable Data Preprocessing Pipelines☆44Updated this week
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Fetches PubMed article IDs (PMIDs) from email inbox, then crawls PubMed, Google Scholar and Sci-Hub for respective PDF files.☆36Oct 23, 2018Updated 7 years ago
- ☆10Jun 1, 2026Updated 4 months ago
- Using Pubmed data and tf.keras to predict if an ophthalmology paper will make it into a top 15 journal☆10May 4, 2020Updated 6 years ago
- A Teaching Engine for Genomics☆12Mar 21, 2021Updated 5 years ago
- Automatic generation of reviews of scientific papers☆30Apr 3, 2025Updated last year
- ☆19Sep 4, 2024Updated 2 years ago
- A Shiny App for visualizing genomic data☆19Apr 24, 2022Updated 4 years ago
- snapper☆14Jul 8, 2024Updated 2 years ago
- CancerMIRNome - an interactive analysis and visualization database for miRNome profiles of human cancer☆12Aug 9, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Spatial Tumor Microenvironment (SpatialTME) database is a comprehensive database designed for characterize tumor spatial microenvironment…☆13Dec 4, 2023Updated 2 years ago
- Use batch balanced KNN (BBKNN) in R☆14Sep 9, 2025Updated last year
- Hierarchical annotation of immune cells n scRNA-Seq data based on ssGSEA algorithm.☆12May 31, 2024Updated 2 years ago
- VenomPred 2.0 API☆11Jul 7, 2026Updated 3 months ago
- Shiny app for geno-pheno catalog☆11Nov 4, 2022Updated 3 years ago
- IAN: An Intelligent System for Omics Data Analysis and Discovery☆20Feb 23, 2026Updated 7 months ago
- R package to do enrichment analysis for neoantigens☆13Feb 21, 2022Updated 4 years ago
- ☆12Aug 30, 2018Updated 8 years ago
- This repository contains the scripts developed for the analysis of CRC samples processed with the 10x VISIUM Spatial Transcriptomics tech…☆12Feb 7, 2023Updated 3 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Python wrapper for OSRA. Supports R-Group logic and integration with ChemSchematicResolver☆10Apr 4, 2020Updated 6 years ago
- Interactive tool for Phosphoproteomics☆15May 6, 2020Updated 6 years ago
- Basic R Shiny LLM chat application☆14Oct 7, 2024Updated 2 years ago
- Abbreviations for use with the Abbreviation Filter developed for use with Multilingual Zotero.☆18Nov 8, 2023Updated 2 years ago
- ☆13Jun 18, 2018Updated 8 years ago
- An interpretable and flexible deep learning framework for single-T cell transcriptome and receptor analysis☆19Jun 9, 2026Updated 4 months ago
- ☆15Nov 2, 2017Updated 8 years ago
- JuliaCN 2022 archived demo repo: How Julia beats MATLAB's C codes by 1000x☆10May 25, 2023Updated 3 years ago
- KGWAS: novel genetics discovery enabled by massive functional genomics knowledge graph☆78Mar 7, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Advanced plotting functions for CNV data generated by CNV-Seq and Control Freec☆13Aug 25, 2020Updated 6 years ago
- BAMixChecker: A fast and efficient tool for sample matching checkup☆16Jun 12, 2022Updated 4 years ago
- Zotero Translators☆14Feb 8, 2023Updated 3 years ago
- Trace Function Parameter Types in R☆17Sep 1, 2026Updated last month
- An R package to create metadata structure for ADaM data analysis and reporting☆18Updated this week
- This repostory contains codes for Shimada et al., "A tool for browsing the Cancer Dependency Map reveals functional connections between g…☆13Sep 3, 2021Updated 5 years ago
- A Molecular Stereostructure Descriptor based on Spherical Projection☆13Nov 14, 2025Updated 10 months ago