btheodorou99 / HALO_Inpatient
☆21Updated last month
Related projects: ⓘ
- ☆26Updated last year
- A Multimodal Transformer: Fusing Clinical Notes With Structured EHR Data for Interpretable In-Hospital Mortality Prediction☆28Updated 2 years ago
- Source code for a comprehensive analysis of MTL over EHR timeseries data.☆34Updated last year
- ☆24Updated 4 years ago
- Experiments applying FIDDLE on MIMIC-III and eICU. https://doi.org/10.1093/jamia/ocaa139☆22Updated 2 years ago
- Python workflow for generating benchmark datasets and machine learning models from the MIMIC-IV-ED database.☆66Updated last year
- code for ehrMGAN☆18Updated last year
- Repository for the HiRID ICU Benchmark (HiB) project☆51Updated last year
- ☆25Updated last year
- FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…☆83Updated 3 months ago
- Patient Code & Text Representation Learning☆20Updated last year
- 🧪Yet Another ICU Benchmark: a holistic framework for the standardization of clinical prediction model experiments. Provide custom datase…☆49Updated this week
- A customizable pipeline for data extraction from MIMIC-IV.☆172Updated 8 months ago
- ☆25Updated 10 months ago
- source codes based on PyTorch to analyze EHR☆124Updated 7 months ago
- ☆36Updated 2 years ago
- This repository contains the code used for Temporal Pointwise Convolutional Networks for Length of Stay Prediction in the Intensive Care …☆76Updated last year
- ☆11Updated last month
- The code for the paper "MediTab: Scaling Medical Tabular Data Predictors via Data Consolidation, Enrichment, and Refinement"☆18Updated 4 months ago
- Schema definitions and Python types for Medical Event Data Standard, a standard for medical event data such as EHR and claims data☆35Updated 2 weeks ago
- circEWS public code☆59Updated last week
- Code for BEHRT: Transformer for Electronic Health Records☆104Updated last year
- Targeted-BEHRT: Deep Learning for Observational Causal Inference on Longitudinal Electronic Health Records☆18Updated last year
- ☆22Updated 11 months ago
- ☆11Updated this week
- ☆21Updated 2 years ago
- This repository contains the code to replicate the data processing, modeling and reporting of our Holistic AI in Medicine (HAIM) Publicat…☆104Updated last year
- python code for BRLTM model☆12Updated 3 years ago
- A simple set of MEDS polars-based ETL and transformation functions☆15Updated 2 weeks ago
- Dataset and modelling infrastructure for modelling "event streams": sequences of continuous time, multivariate events with complex intern…☆98Updated 3 weeks ago