statisticalbiotechnology / GPTime
Chromatographic Retention Time prediction with Gaussian Procsses
☆9Updated 6 years ago
Alternatives and similar repositories for GPTime:
Users that are interested in GPTime are comparing it to the libraries listed below
- An open-source Python package to unify raw MS data accession and storage.☆18Updated last week
- RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.☆25Updated last year
- MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics☆14Updated 2 years ago
- A collection of common mz values found in mass spectrometry.☆19Updated 7 months ago
- ☆13Updated 10 months ago
- TimsR: Easy access to timsTOF Pro data from R.☆9Updated 3 years ago
- EasyPQP: Simple library generation for OpenSWATH☆10Updated 2 weeks ago
- ☆8Updated 4 months ago
- Metabolomics software for database-assisted deconvolution of MS/MS spectra☆18Updated last year
- ☆17Updated 3 years ago
- ProXL Web App -- Visualize and Share Protein Cross-linking Data☆12Updated 6 months ago
- ☆16Updated 5 years ago
- mz.unity is an R package for detecting and exploring complex relationships in accurate-mass mass spectrometry data☆13Updated 8 years ago
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆26Updated last week
- ☆11Updated 2 years ago
- MS/MS prediction for peptides☆22Updated 4 years ago
- Molecular formula discovery via bottom-up MS/MS interrogation☆13Updated 4 months ago
- A bioinformatic tool facilitating automated in-source fragmentation identification☆10Updated 2 years ago
- Brings Orbitrap mass spectrometry data to life; multi-platform, fast and colorful R package☆36Updated 8 months ago
- ☆25Updated last year
- Scalable and self-optimizing processing workflow for untargeted LC-MS☆28Updated 5 months ago
- A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.☆13Updated last year
- R-package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics☆15Updated 8 months ago
- Fast and flexible semi-supervised learning for peptide detection in Python☆43Updated last month
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆21Updated 3 weeks ago
- pathway and network analysis for metabolomics☆39Updated 8 months ago
- Matthew The's implementation of MaRaCluster☆11Updated 2 years ago
- Democratizing ML in proteomics☆34Updated 2 weeks ago
- ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…☆43Updated this week
- MetEx is a tool to extract and annotate metabolites from liquid chromatography–mass spectrometry data.☆16Updated last year