shenwei356 / csvtkLinks
A cross-platform, efficient and practical CSV/TSV toolkit in Golang
☆1,117Updated last week
Alternatives and similar repositories for csvtk
Users that are interested in csvtk are comparing it to the libraries listed below
Sorting:
- A cross-platform command-line tool for executing jobs in parallel☆1,051Updated 3 weeks ago
- A cross-platform and ultrafast toolkit for FASTA/Q file manipulation☆1,478Updated 2 weeks ago
- biogo is a bioinformatics library for Go☆400Updated last year
- A practical cross-platform command-line tool for safely batch renaming files/directories via regular expression☆295Updated 2 months ago
- BWK awk modified for biological data☆631Updated 3 years ago
- biogo high throughput sequencing repository☆130Updated 2 months ago
- Specification for the Workflow Description Language (WDL).☆833Updated last week
- A Variant Call Format reader for Python.☆417Updated 2 years ago
- Versatile open-source tool for microbiome analysis☆719Updated last week
- Interactively explore metagenomes and more from a web browser.☆491Updated 3 years ago
- goleft is a collection of bioinformatics tools distributed under MIT license in a single static binary☆224Updated last month
- Command-line CSV processing utility.☆206Updated 6 months ago
- A lightweight and high-performance bioinformatics package in Golang☆95Updated 2 months ago
- Bayesian haplotype-based genetic polymorphism discovery and genotyping.☆849Updated 5 months ago
- bedtools - the swiss army knife for genome arithmetic☆1,004Updated 7 months ago
- This is the official development repository for BCFtools. See installation instructions and other documentation here http://samtools.gith…☆818Updated this week
- Intuitive graphical web interface for running BLAST bioinformatics tool (i.e. have your own custom NCBI BLAST site!)☆289Updated this week
- Python package with helper tools for the nf-core community.☆276Updated this week
- Efficient pythonic random access to fasta subsequences☆479Updated last month
- C library for high-throughput sequencing data formats☆886Updated last week
- Aggregate results from bioinformatics analyses across many samples into a single report.☆1,384Updated this week
- cython + htslib == fast VCF and BCF processing☆415Updated 2 weeks ago
- Text Only Genome Viewer!☆229Updated 4 months ago
- Automatically exported from code.google.com/p/figtree☆441Updated 4 months ago
- Tools (written in C using htslib) for manipulating next-generation sequencing data☆1,800Updated last week
- Transcript assembly and quantification for RNA-Seq☆470Updated last week
- elPrep: a high-performance tool for analyzing sequence alignment/map files in sequencing pipelines.☆290Updated 2 years ago
- a Bioinformatics Application for Navigating De novo Assembly Graphs Easily☆646Updated 2 years ago
- Quickly search, compare, and analyze genomic and metagenomic data sets.☆524Updated this week
- Toolkit for processing sequences in FASTA/Q formats☆1,503Updated 5 months ago