shenwei356 / csvtk
A cross-platform, efficient and practical CSV/TSV toolkit in Golang
☆1,018Updated last week
Related projects ⓘ
Alternatives and complementary repositories for csvtk
- A cross-platform command-line tool for executing jobs in parallel☆879Updated last week
- A cross-platform and ultrafast toolkit for FASTA/Q file manipulation☆1,321Updated last week
- biogo is a bioinformatics library for Go☆381Updated 7 months ago
- A practical cross-platform command-line tool for safely batch renaming files/directories via regular expression☆262Updated 7 months ago
- A lightweight and high-performance bioinformatics package in Golang☆92Updated 2 months ago
- BWK awk modified for biological data☆592Updated 2 years ago
- biogo high throughput sequencing repository☆125Updated 7 months ago
- Lollipop-style mutation diagrams for annotating genetic variations.☆185Updated last month
- Efficient pythonic random access to fasta subsequences☆459Updated 3 weeks ago
- Bpipe - a tool for running and managing bioinformatics pipelines☆230Updated 2 weeks ago
- Workflow Description Language - Specification and Implementations☆775Updated last month
- C library for high-throughput sequencing data formats☆812Updated last week
- bedtools - the swiss army knife for genome arithmetic☆938Updated 3 months ago
- This is the official development repository for BCFtools. See installation instructions and other documentation here http://samtools.gith…☆675Updated 2 weeks ago
- A Practical and Efficient NCBI Taxonomy Toolkit, also supports creating NCBI-style taxdump files for custom taxonomies like GTDB/ICTV☆380Updated this week
- goleft is a collection of bioinformatics tools distributed under MIT license in a single static binary☆216Updated last month
- cython + htslib == fast VCF and BCF processing☆380Updated last month
- Performant Pythonic GenomicRanges☆442Updated 5 months ago
- Toolkit for processing sequences in FASTA/Q formats☆1,391Updated 3 months ago
- A Variant Call Format reader for Python.☆404Updated last year
- A curated list of nextflow based pipelines☆572Updated 2 years ago
- Bayesian haplotype-based genetic polymorphism discovery and genotyping.☆787Updated 5 months ago
- a Bioinformatics Application for Navigating De novo Assembly Graphs Easily☆586Updated last year
- Bioinformatics containers☆684Updated 3 weeks ago
- Versatile open-source tool for microbiome analysis☆668Updated last week
- Aggregate results from bioinformatics analyses across many samples into a single report.☆1,221Updated this week
- Gene cluster comparison figure generator☆530Updated last month
- C++ library and cmdline tools for parsing and manipulating VCF files with python and zig bindings☆620Updated last week
- Text Only Genome Viewer!☆206Updated 3 months ago
- Graph-based alignment (Hierarchical Graph FM index)☆477Updated 3 months ago