shenwei356 / csvtkLinks
A cross-platform, efficient and practical CSV/TSV toolkit in Golang
☆1,138Updated last week
Alternatives and similar repositories for csvtk
Users that are interested in csvtk are comparing it to the libraries listed below
Sorting:
- A cross-platform command-line tool for executing jobs in parallel☆1,070Updated 2 weeks ago
- A practical cross-platform command-line tool for safely batch renaming files/directories via regular expression☆296Updated 5 months ago
- A cross-platform and ultrafast toolkit for FASTA/Q file manipulation☆1,500Updated last week
- biogo is a bioinformatics library for Go☆404Updated last year
- biogo high throughput sequencing repository☆132Updated 5 months ago
- BWK awk modified for biological data☆636Updated 3 years ago
- Specification for the Workflow Description Language (WDL).☆841Updated this week
- A lightweight and high-performance bioinformatics package in Golang☆95Updated 3 months ago
- A Variant Call Format reader for Python.☆418Updated 2 years ago
- Bayesian haplotype-based genetic polymorphism discovery and genotyping.☆860Updated 8 months ago
- goleft is a collection of bioinformatics tools distributed under MIT license in a single static binary☆224Updated 4 months ago
- Versatile open-source tool for microbiome analysis☆736Updated 2 weeks ago
- Interactively explore metagenomes and more from a web browser.☆490Updated 4 years ago
- Automatically exported from code.google.com/p/figtree☆453Updated 7 months ago
- Efficient pythonic random access to fasta subsequences☆482Updated 4 months ago
- cython + htslib == fast VCF and BCF processing☆426Updated 3 months ago
- Language and framework for high performance computational pipelines.☆159Updated last week
- This is the official development repository for BCFtools. See installation instructions and other documentation here http://samtools.gith…☆839Updated last month
- elPrep: a high-performance tool for analyzing sequence alignment/map files in sequencing pipelines.☆290Updated 2 years ago
- bedtools - the swiss army knife for genome arithmetic☆1,020Updated 10 months ago
- Command-line CSV processing utility.☆208Updated 2 months ago
- Transcript assembly and quantification for RNA-Seq☆484Updated last month
- a Bioinformatics Application for Navigating De novo Assembly Graphs Easily☆666Updated 3 years ago
- better(?) xargs in go☆146Updated 8 years ago
- Bpipe - a tool for running and managing bioinformatics pipelines☆239Updated 2 months ago
- a golang library to read, write and manipulate files in the variant call format.☆73Updated 5 months ago
- Intuitive graphical web interface for running BLAST bioinformatics tool (i.e. have your own custom NCBI BLAST site!)☆295Updated 2 months ago
- Text Only Genome Viewer!☆230Updated this week
- Sequence-to-graph mapper and graph generator☆467Updated 5 months ago
- annotate a VCF with other VCFs/BEDs/tabixed files☆396Updated 5 months ago