Alternatives and similar repositories for trekker

Users that are interested in trekker are comparing it to the libraries listed below

• scilus / scilpy
  The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox
  ☆93Updated last week
• hMRI-group / hMRI-toolbox
  A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)
  ☆77Updated last week
• ecaruyer / qspace
  q-space: multishell sampling and continuous reconstruction of diffusion signal
  ☆19Updated 6 months ago
• scilus / tractoflow
  TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity
  ☆62Updated last year
• pnlbwh / dMRIharmonization
  Multi-site dMRI harmonization
  ☆49Updated 8 months ago
• NYU-DiffusionMRI / DESIGNER-v1
  Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline
  ☆51Updated last year
• AthenaEPI / dmipy
  The open source toolbox for reproducible diffusion MRI-based microstructure estimation
  ☆115Updated last year
• ExploreASL / ExploreASL
  ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…
  ☆58Updated this week
• MASILab / Synb0-DISCO
  Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
  ☆83Updated 5 months ago
• MASILab / PreQual
  An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images
  ☆53Updated last year
• nipreps / dmriprep
  dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…
  ☆73Updated 2 months ago
• QMICodeBase / TORTOISEV4
  Official TORTOISE Diffusion MRI Processing Pipeline V4 Source Code and Documentation
  ☆33Updated last month
• Diffusion-MRI / awesome-preclinical-diffusion-mri
  ☆18Updated 2 years ago
• yeatmanlab / AFQ
  Automated Fiber Quantification
  ☆77Updated last year
• daducci / AMICO
  Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data
  ☆122Updated last month
• rordenlab / niimath
  niimath - a clone of fslmaths. Try the live demo:
  ☆71Updated 2 months ago
• yeatmanlab / pyAFQ
  Please visit our new location: https://github.com/tractometry/pyAFQ
  ☆60Updated last year
• robbert-harms / MDT
  Microstructure Diffusion Toolbox
  ☆57Updated last year
• PennLINC / qsiprep
  Preprocessing of diffusion MRI
  ☆171Updated last month
• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆73Updated last month
• braincharter / vasculature
  Region- and voxel-based probabilistic mapping of whole-brain veins and arteries (densities and diameter) in the MNI space
  ☆50Updated 3 years ago
• daducci / COMMIT
  Linear framework to combine tractography and tissue microstructure estimation with diffusion MRI
  ☆47Updated last month
• wwu-mmll / deepbet
  Fast brain extraction using neural networks
  ☆45Updated last year
• nipreps / sdcflows
  Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes
  ☆43Updated this week
• BIC-MNI / minc-toolkit-v2
  Version 2 of the minc-toolkit, uses tools based on ITK version 4.x
  ☆53Updated 7 months ago
• aces / CIVET_Full_Project
  CIVET Installer
  ☆30Updated 3 years ago
• JosePMarques / MP2RAGE-related-scripts
  MP2RAGE Scripts - T1 map correction & Background noise removal
  ☆70Updated 2 years ago
• Jfortin1 / RAVEL
  Intensity normalization of structural MRIs using RAVEL
  ☆32Updated 2 years ago
• nipreps / eddymotion
  Open-source eddy-current and head-motion correction for dMRI.
  ☆19Updated 11 months ago
• ekaden / smt
  Microscopic diffusion anisotropy imaging made easy!
  ☆26Updated 7 years ago