dMRI based fiber tracking using parallel transport tractography
☆30May 18, 2026Updated last week
Alternatives and similar repositories for trekker
Users that are interested in trekker are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Linear framework to combine tractography and tissue microstructure estimation with diffusion MRI☆51May 14, 2026Updated 2 weeks ago
- Official TORTOISE Diffusion MRI Processing Pipeline V4 Source Code and Documentation☆34May 21, 2026Updated last week
- Converter for different neuro-imaging file formats.☆19Oct 29, 2017Updated 8 years ago
- White matter tractography clustering and more...☆80Jun 13, 2025Updated 11 months ago
- Public release of Track-to-Learn: A general framework for tractography with deep reinforcement learning☆26Feb 4, 2026Updated 3 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ISBI 2023 - A Registration- and Uncertainty-based Framework for White Matter Tract Segmentation with Only One Annotated Subject☆10Sep 10, 2023Updated 2 years ago
- Tract based spatial statistics using ANTs and FSL☆17Mar 10, 2025Updated last year
- Simulate realistic diffusion-weighted MR data☆19Mar 2, 2023Updated 3 years ago
- Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data☆128Dec 19, 2025Updated 5 months ago
- ASL pipeline for the Human Connectome Project☆13Oct 2, 2025Updated 7 months ago
- The dHCP deep learning-based neonatal structural MRI processing pipeline.☆21Oct 17, 2024Updated last year
- Microstructure Diffusion Toolbox☆60Mar 4, 2024Updated 2 years ago
- A Tractography Tool for Diffusion MRI☆155May 21, 2026Updated last week
- Convert the TotalSegmentator dataset into the nnUNet format☆20Aug 1, 2023Updated 2 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- q-space: multishell sampling and continuous reconstruction of diffusion signal☆20Jan 23, 2026Updated 4 months ago
- [NeurIPS D&B'24]Enhancing vision-language models for medical imaging: bridging the 3D gap with innovative slice selection☆24Mar 25, 2026Updated 2 months ago
- TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity☆63Sep 23, 2024Updated last year
- Microscopic diffusion anisotropy imaging made easy!☆26Jan 14, 2019Updated 7 years ago
- Convolutional-recurrent neural networks approximate diffusion tractography from T1-weighted MRI and associated anatomical context☆22Aug 6, 2025Updated 9 months ago
- E3xSO3 convolution implementation presented at MIDL 2023 https://openreview.net/pdf?id=lri_iAbpn_r☆14Apr 12, 2023Updated 3 years ago
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆74Feb 14, 2026Updated 3 months ago
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆53Feb 11, 2026Updated 3 months ago
- Julia package for microstructure imaging☆21Nov 24, 2025Updated 6 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- MATLAB routines for fMRI/EEG/MEG data processing and visualization with FreeSurfer☆16May 21, 2026Updated last week
- An R package to simulate fMRI Data Including Activated Data, Noise Data and Resting State Data☆11Sep 12, 2019Updated 6 years ago
- Implementation of the White Matter Query Language and associated tools for dMRI white matter tract extraction and analysis☆31Jul 24, 2025Updated 10 months ago
- A Web-Based Visualization Tool for Biclustering of Multivariate Time Series☆10Feb 17, 2023Updated 3 years ago
- CHAP (Connectome Harmonic Analysis Pipeline)☆12Feb 28, 2025Updated last year
- ORG Fiber Clustering White Matter Atlas☆31Oct 18, 2025Updated 7 months ago
- Bash script to compute DTI-ALPS☆81Sep 12, 2025Updated 8 months ago
- MITK Diffusion - Official part of the Medical Imaging Interaction Toolkit☆103Feb 24, 2026Updated 3 months ago
- NOW - Numerical Optimization of gradient Waveforms☆19Apr 28, 2026Updated last month
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Browser-based visualization tools for AFQ results☆33Apr 13, 2026Updated last month
- We created a model to remove physiological noise in fast fMRI without external reference signals.☆13Oct 21, 2019Updated 6 years ago
- Curation of BIDS (CuBIDS): A sanity-preserving software package for processing BIDS datasets.☆30Mar 16, 2026Updated 2 months ago
- ☆13Apr 14, 2025Updated last year
- PREEMACS. pipeline for PREprocessing and Extraction of the MACaque brain Surface☆18May 22, 2024Updated 2 years ago
- Dockerfiles for FreeSurfer☆12Apr 10, 2026Updated last month
- A template for decentralized, reproducible processing☆16Aug 19, 2024Updated last year