Alternatives and similar repositories for atomium

Users that are interested in atomium are comparing it to the libraries listed below

• jgreener64 / mmterm
  View proteins and trajectories in the terminal
  ☆112Updated 5 years ago
• clauswilke / PeptideBuilder
  A simple Python library to generate model peptides
  ☆90Updated 5 years ago
• PDBeurope / arpeggio
  Calculation of interatomic interactions in molecular structures
  ☆114Updated last year
• avirshup / py3dmol
  ☆133Updated 9 years ago
• volkamerlab / opencadd
  A Python library for structural cheminformatics
  ☆103Updated last month
• jchodera / statmech-for-biochemists
  A primer on statistical mechanics for biochemists
  ☆48Updated 3 years ago
• Electrostatics / apbs
  Software for biomolecular electrostatics and solvation calculations
  ☆119Updated last year
• MooersLab / pymolshortcuts
  The repository pymolschortucts contains the a collection of shortcuts that are loaded on startup of PyMOL. These shortcuts enable websear…
  ☆85Updated 3 months ago
• mittinatten / freesasa
  C-library for calculating Solvent Accessible Surface Areas
  ☆169Updated last month
• insilichem / pychimera
  Use UCSF Chimera Python API in a standard interpreter
  ☆59Updated 6 years ago
• cmbi / hssp
  Create DSSP and HSSP files
  ☆94Updated last year
• rcsb / py-mmcif
  mmCIF Core Access Library
  ☆49Updated this week
• rcsb / py-rcsbsearchapi
  Python interface for the RCSB PDB search API.
  ☆65Updated 8 months ago
• RashmiKumari / g_mmpbsa
  MM-PBSA method for GROMACS. For full description, please visit homepage:
  ☆68Updated 6 months ago
• freesasa / freesasa-python
  FreeSASA Python Module
  ☆58Updated 4 months ago
• PDBeurope / pdbecif
  A lightweight pure python package for reading, writing and manipulating mmCIF files distributed by the wwPDB"
  ☆39Updated 2 years ago
• michellab / BioSimSpace
  Code and resources for the EPSRC BioSimSpace project.
  ☆78Updated 3 months ago
• speleo3 / pymol-psico
  Pymol ScrIpt COllection (PSICO)
  ☆64Updated 4 months ago
• pstansfeld / MemProtMD
  ☆46Updated last month
• KULL-Centre / CALVADOS
  ☆78Updated 2 months ago
• npschafer / openawsem
  An implementation of the AWSEM coarse-grained protein folding forcefield in OpenMM
  ☆38Updated 6 months ago
• cxhernandez / ipymol
  Control PyMOL sessions via IPython
  ☆61Updated 3 years ago
• maccallumlab / meld
  Modeling with limited data
  ☆59Updated this week
• reymond-group / map4
  The MinHashed Atom Pair fingerprint of radius 2
  ☆118Updated 2 years ago
• bowman-lab / enspara
  Modeling molecular ensembles with scalable data structures and parallel computing
  ☆37Updated last month
• ShintaroMinami / PyDSSP
  A simplified implementation of DSSP algorithm for PyTorch and NumPy
  ☆96Updated 6 months ago
• rlabduke / MolProbity
  Protein and nucleic acid validation service
  ☆91Updated last year
• dwhswenson / contact_map
  Contact map analysis for biomolecules; based on MDTraj
  ☆47Updated last year
• openkinome / kinoml
  Structure-informed machine learning for kinase modeling
  ☆58Updated this week
• kassonlab / gmxapi
  (outdated) fork of https://gitlab.com/gromacs/gromacs
  ☆53Updated 2 years ago